Helicobacter acinonychis: Hac_0160
Help
Entry
Hac_0160 CDS
T00371
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hac
Helicobacter acinonychis
Pathway
hac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hac_0160 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hac03021
]
Hac_0160 (rpoA)
03400 DNA repair and recombination proteins [BR:
hac03400
]
Hac_0160 (rpoA)
Enzymes [BR:
hac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hac_0160 (rpoA)
Transcription machinery [BR:
hac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Hac_0160 (rpoA)
DNA repair and recombination proteins [BR:
hac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Hac_0160 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
CAJ99012
UniProt:
Q17ZB4
LinkDB
All DBs
Position
137014..138048
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRIKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSPLENQSVVVDYSFKGPMELR
ARDLNSEHIEIINPEMLLATINEDAQLNFSLIIYKGMGYVPSEITRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGEKPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSLEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcggattaagatttctctagctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggctcttgcttttaagttccgtggggtatgctcctgtgggtttaaag
attgaaggcgtccatcatgagtttgattcattaagaggcgttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgttttatagccaaggcgttagtggggcaggatagc
cctttggaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttaaattctgagcatatagaaatcatcaatcctgaaatgctcctagccacg
atcaacgaagacgctcaattgaatttttcgctcatcatttataaaggaatggggtatgtc
ccaagcgaaattacaagagaattgatgcctgaaggttacatgcctttagatggatctttt
acgccgattaaaaatgtggtttatgagattgaaaatgttttggttgagggcgatcctaac
tatgaaaaaatcatttttgatattgaaacagatgggcaaattgatccttacaaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactaggcgtttttggtgaaaaacccattgct
aacacagagtattcaggcgattacgcccaaagagatgatgctaaagatttgagcgctaag
attgaaagtatgaatttgagcgctaggtgttttaattgcttggataaaatcggtatcaag
tatgtgggcgaactggttttaatgagcgaagaagagcttaaaggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttaggctatcctgtaggcaca
gaattaagccttgaacaaagagagagtttgaaaaaaagattagaaaaattagaagataaa
ggaggtaatgactga
DBGET
integrated database retrieval system
