Helicobacter acinonychis: Hac_1370
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Entry
Hac_1370 CDS
T00371
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hac
Helicobacter acinonychis
Pathway
hac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hac_1370 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hac03019
]
Hac_1370 (deaD)
03009 Ribosome biogenesis [BR:
hac03009
]
Hac_1370 (deaD)
Enzymes [BR:
hac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Hac_1370 (deaD)
Messenger RNA biogenesis [BR:
hac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Hac_1370 (deaD)
Ribosome biogenesis [BR:
hac03009
]
Prokaryotic type
rRNA helicases
Hac_1370 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
AAA_30
Cas3-like_C_2
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
CAK00105
UniProt:
Q17W71
LinkDB
All DBs
Position
complement(1181007..1182491)
Genome browser
AA seq
494 aa
AA seq
DB search
MEFVHDDSQLPIEIDDDAYRKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGR
DVIAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTKTKT
VCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGF
LDDIEEIFDYLPSEAQILLFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYV
INEHERSEAIMHLLDTQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRA
SIMAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAI
TLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHGAKVSEGVISLYEQLTEIFE
PSQLILKLLSLQFETNKIGLNQQEIDAIQNPKERVPKPPHKKTHKTEQAHSFKKSRHRDK
YPKTNRYSKKPKRH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgttcatgatgattcacaactccccatagaaattgatgacgacgcttaccgt
aagcctagtttcaatgatttaggcttaaaagaatcggttttaaaatccgtttatgaagcc
ggcttcacttccccaagccccattcaagaaaaggccattcctgccgttttacaaggtaga
gatgttatcgcacaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcctatc
atcaataatcttaaaaacaaccacaccatagaagccttagtgatcacgcccactagagaa
ttggctatgcaaattagcgatgagatcttcaaattaggcaaacacaccaagactaaaacc
gtgtgcgtgtatggagggcagagcgttaaaaaacaatgcgaatttattaagaaaaacccc
caagtgatgatcgccacgccaggaagattattggatcatttaaaaaacgatcgcatccat
aaatttgtgcctaaagtggtcgttctagatgaaagcgatgaaatgctagatatggggttt
ttagatgatattgaagagatttttgactatctccctagtgaagcacagatcttgcttttt
tcagccacgatgccagagccgattaaaaaactagcggataagattttagaaaaccccatt
aaaatccatatcgccccttctaatatcacaaacactgatattacccaacgcttttatgtg
atcaacgagcatgaaagatctgaagcgatcatgcaccttttagacacccaagcaccagaa
aaaagcattgttttcacgcgcaccaaaaaagaggccgatgaattgcaccaattccttatt
tccaaaaattacaaaagcaccgccttgcatggggatatggatcaaagggatcggcgtgct
tctatcatggcgtttaaaaaaaatgacgctgatgtgttggtggctacggatgtggcgagc
cgtgggctagacattagcggtgtaagccatgtgttcaattaccacttacccctaaacact
gagagttatatccatcgcattggaagaactgggcgagcgggcaaaaaaggcatggcgatc
actttagttacgcctttagaatacaaagagcttttacgcatgcaaaaagaaattgattca
gaaattgagctttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttacat
ggtgctaaagtgtctgaaggggttattagcctttatgaacagcttaccgaaatttttgaa
ccctctcaactgatcttaaaacttttgagtttgcagtttgaaaccaacaaaattggctta
aaccaacaagagattgatgcgattcaaaaccctaaagaaagagtgccaaaacccccacat
aaaaaaacgcacaaaactgagcaagcacactctttcaaaaagagtcgccacagagacaaa
taccctaaaacgaatcgttattctaaaaaacccaaacgccattaa
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