Halobaculum sp. CBA1158: Hbl1158_00075
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Entry
Hbl1158_00075 CDS
T08013
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbl1158_00075 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_00075 (uvrB)
DNA repair and recombination proteins [BR:
hacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbl1158_00075 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hbl1158_00075 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
DUF87
TerB
Motif
Other DBs
NCBI-ProteinID:
UIO99812
LinkDB
All DBs
Position
16606..18693
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AA seq
695 aa
AA seq
DB search
MSESQGPLSPDRPEAEKPLRVDAPFDPAGDQPDAIRQLVDGFESGMTEQTLLGVTGSGKT
NTVSWVVEELDTPTLVIAHNKTLAAQLYEEFRNLFPDNAVEYFVSYYNYYQPEAYVEQTD
TYIDKEMSINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPNNYRGMALELEVGQE
IGRDELLKQLVDLNYERNDVDFQQGTFRVRGDTVEVFPMYGRHAVRIELWGDEIDRMRKV
DVVDGEVVSDEPAALIHPAEHYSLPEEQIDQAVSEIEELMEQRVSYFERQGDLVAAQRIE
ERTTFDIEMLQETGYCSGIENYSVHLSDRESGDAPYTLLDYFPDDFLTVIDESHQTLPQI
KGQYEGDKSRKDSLVGNGFRLPTAYDNRPLTFEEFEEKTDRRLYVSATPADYERERSEQI
VEQIVRPTHLVDPEVTVEPAQGQVDDLMDRIDDRIERGERTLVTTLTKRMAEDLTEYLEE
AGVEVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEGF
LRSETTLVQTMGRAARNVEGEVILYADETTGAMEAAIEETNRRREIQREFNEEHGYEPQT
IDKEIGETNLPGSKTDTSGVADDEVADEAEAQARIQALEERMEEAASNLEFELAADIRDR
IQDLRREFDVDPEEVGIEPPGEDTDGIDPGPGAEF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcgcaggggcccctctcgccggaccggcccgaggccgagaagccgcttcgc
gtcgacgccccgttcgaccccgcgggcgaccagcccgacgcgatccgccagttggtggac
ggtttcgagtccgggatgaccgagcagacgctgctcggcgtcaccggctccgggaagacg
aacaccgtctcgtgggtcgtcgaggaactcgacaccccgacgctcgtgatcgcccacaac
aagacgctcgcggcgcagttgtacgaggagttccggaacctcttccccgacaacgccgtc
gagtacttcgtctcctactacaactactaccagcccgaggcgtacgtcgaacagacggac
acctacatcgacaaggagatgtcgatcaacgacgagatcgaccgcctcaggcactccgca
acccgctctctcctcacgcgggacgacgtgatcgtcgtggcgtcggtctcggccatctac
gggctgggcgaccccaataactaccgcgggatggcgctggagttggaggtcggccaggag
atcggccgcgacgaactgctgaagcaactggtcgacctgaactacgagcgcaacgacgtg
gacttccagcaagggacgttccgcgtgcgcggggacacggtcgaggtgttcccgatgtac
ggccgccacgccgtccggatcgagctgtggggcgacgagatcgaccgcatgcgtaaggtc
gacgtggtcgacggcgaggtcgtgagcgacgaacccgccgcgctgatccaccccgcggaa
cactactcgctccccgaggagcagatcgaccaggcggtctcggagatcgaggagctgatg
gagcagcgcgtctcgtacttcgagcgccagggcgacctcgtcgccgcccagcgaatcgag
gagcgcaccaccttcgacattgagatgctccaggagacgggctactgctcgggcatcgag
aactactccgtccacctctcggaccgcgagtccggcgacgcaccctacaccctgctggac
tatttccccgacgacttcctcacggtgatcgacgagtcccaccagacgctccctcagatc
aaaggacagtacgagggcgacaagtcgcgcaaggactcgcttgtcggcaacggattccgc
ctgccgacggcgtacgacaaccgcccgctcaccttcgaggagttcgaggagaagaccgac
cgccgtctgtacgtctcggccacccccgcggactacgagcgcgagcgctccgagcagatc
gtcgagcagatcgtccgccccacccacctcgtcgaccccgaggtgaccgtcgagcccgcg
cagggacaggtggacgacctgatggaccgcatcgacgaccgcatcgagcgcggcgagcgc
accctcgtcaccaccctcaccaagcggatggccgaggacctcaccgagtacctcgaggag
gccggcgtcgaggtcgcgtacatgcacgacgagaccgacaccctggagcgccacgagatc
atccgctcgctccggctgggggagatcgacgtgctcgtcggcatcaacctcctccgggag
ggactggacatccccgaggtctccctcgtcgcgatcctcgacgccgaccaggaggggttc
ctccgatccgagaccaccctcgtgcagacgatgggtcgcgccgcccggaacgtcgaaggc
gaggtgatcctctatgccgacgagacgacgggcgcgatggaggcggcgatcgaggagacc
aaccgccgtcgcgagatccaacgcgagttcaacgaggagcacggctacgagccgcagacg
atcgacaaggagatcggcgagacgaacctccccgggtcgaagaccgacacctccggtgtc
gccgacgacgaggtggccgacgaggcggaggcgcaggcgcggatccaggcgctcgaagag
cgcatggaggaggccgcgagcaacctggagttcgagctggcggcggacatccgcgaccgg
attcaggacctccgccgagagttcgacgttgaccccgaggaggtcgggatcgagccgccg
ggcgaggacaccgacgggatcgatccgggccccggcgctgagttctag
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