Halobaculum sp. CBA1158: Hbl1158_00840
Help
Entry
Hbl1158_00840 CDS
T08013
Name
(GenBank) endonuclease NucS
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hacb
Halobaculum sp. CBA1158
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hacb03032
]
Hbl1158_00840
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_00840
Enzymes [BR:
hacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hbl1158_00840
DNA replication proteins [BR:
hacb03032
]
Prokaryotic type
DNA Topoisomerases
Hbl1158_00840
DNA repair and recombination proteins [BR:
hacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hbl1158_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
NucS_N
DmmA-like_C
Zn_ribbon_6
Auto_anti-p27
HypA
Zn_ribbon_FGT1_2
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
UIO99954
LinkDB
All DBs
Position
complement(181150..181929)
Genome browser
AA seq
259 aa
AA seq
DB search
MSQTTTILAGDCTTRFETATTSDERIHRGRVVVLAKPDRTVLVHDRAGYQPVAWLTRPDS
LTVEADDDGFAVTARDGDQRLSVRSHDAGEVVERPISAAGVPVGECPDPDCRAALVRAGG
DVVCLGCGDAYGLPPGATVHDDDTCDDCGLPTMTVARGEKLRLCVDYACESLTEAVRGVL
DRRFDCPDCGRDLRVREHRGRAFLGCDGYPDCETAFSVPSGTFAGECACGLPRFETATGV
RCLDGTCERDRPAEPNVGP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaccacgacgatcctcgcgggcgactgcacgacccggttcgagacggcgacg
accagcgacgagcgcatccatcgcgggcgggtcgtcgtcctcgccaagcccgaccgcacg
gtcctcgtccacgaccgcgccggctaccagcccgtcgcgtggctcaccagacccgactcg
ctcaccgtcgaggccgacgacgacggcttcgcggtcaccgcccgcgacggcgaccaacgg
ctctcagtgcgctcacacgacgccggcgaggtcgtcgagcgaccgatatccgccgccggc
gtcccggtcggcgagtgccccgaccccgactgccgggcggcgctggtgcgggccggcggc
gacgtggtctgtctgggctgtggcgacgcgtacggcctcccgccgggcgcgacggtccac
gacgacgacacctgcgacgactgcgggcttccgacgatgaccgtcgcgcgcggtgagaag
ctccggctgtgcgtcgactacgcgtgtgagtcgctgaccgaggcggttcgaggggtgctc
gaccggcggttcgactgccccgactgcgggcgcgacctgcgcgtccgggagcaccgcggc
cgggcgttcctcgggtgcgacggctatccggactgcgagacggccttctccgtgccgtcg
ggcacgttcgccggcgagtgcgcctgcggcctgccgcgcttcgagacggcgacgggcgtg
cgctgtctcgacggtacctgcgagcgcgaccgacccgccgagccgaacgtcggcccctga
DBGET
integrated database retrieval system
