Halobaculum sp. CBA1158: Hbl1158_01235
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Entry
Hbl1158_01235 CDS
T08013
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Hbl1158_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_01235
03019 Messenger RNA biogenesis [BR:
hacb03019
]
Hbl1158_01235
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Hbl1158_01235
RNA polymerase I system
Hbl1158_01235
Messenger RNA biogenesis [BR:
hacb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Hbl1158_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
Zn_Ribbon_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-ProteinID:
UIP00024
LinkDB
All DBs
Position
complement(254549..254746)
Genome browser
AA seq
65 aa
AA seq
DB search
MAEDRLACRECHFVNGPDAQTCENCGSSSLTEDWAGYVIIPHPEKSEIAPEMNVQEPGSY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaccgcctcgcgtgtcgcgagtgccacttcgtcaacggccccgacgcccag
acgtgcgagaactgcggctcctcctcgctgacggaggactgggccggctacgtcatcatc
ccgcaccccgagaagtccgagatcgctccggagatgaacgttcaggagccgggcagctac
gcgctgaaggtccggtaa
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