Halobaculum sp. CBA1158: Hbl1158_02160
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Entry
Hbl1158_02160 CDS
T08013
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_02160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_02160
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_02160
Prokaryotic type
Archaeal type
TFB
Hbl1158_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
Cas12f1-like_TNB
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
UIP00196
LinkDB
All DBs
Position
complement(436408..437277)
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AA seq
289 aa
AA seq
DB search
MATSTATCPECEGRVRADGDETVCRDCGLVVAEDRIDRGPEWRSFADDDRDPRRTGAPLT
RSRHDRGLSTEIGRTRVKGRKRRQWARMRRQHTRARISSKRDRNRVYGFTEIRRLVSAAG
LPESLRDQACTLFESAQDADLLRGRSLEGFAAACVYVACRVTGVSRTRGELVADAKADAD
ELRAAFDAMNRELGLPVGPIDPAEYLPRFATELDLAIDVERDAREYLDLAADLGLTNGRN
PGGVAGACLYLAARDADADCTQAAAADVADVTPVTLRSSVVDLRENRTE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagcacggcgacgtgtccggagtgcgagggacgagtgcgcgcggacggcgac
gagaccgtgtgtcgagactgcggactcgtcgtcgcggaggaccggatcgaccgcgggcca
gagtggcggagcttcgccgacgacgaccgcgacccacgacgcacgggggcaccgttgacc
cgctcgcgccacgaccgcgggctctcgacggagatcgggcgcacccgggtcaagggacgc
aagcgccggcagtgggcccgcatgcgccgccagcacacacgggcgcggatctccagcaag
cgcgaccgcaaccgcgtgtacggcttcaccgagatccgccggctcgtctcggcggcgggc
ctgcccgagtcgctcagggatcaggcgtgtacgctgttcgagtcggcccaggacgccgac
ctcctgcgcgggcgctcgctggaggggttcgcggccgcctgcgtgtacgtcgcctgccgc
gtcaccggcgtctcgcgcacccgcggagagctcgtcgcggacgcgaaggccgacgccgac
gaactgcgcgccgccttcgacgcgatgaaccgcgagttgggactcccggtcgggccgatc
gatcccgccgagtacctcccgcggttcgccacggagctggatctggcgatcgacgtggag
cgcgacgcccgcgagtacctcgacctcgccgcggatctggggctcacgaacggccgcaac
cccggcggcgtcgccggcgcgtgtctgtatctcgccgcccgcgacgccgacgccgactgc
acgcaggcggccgccgccgacgtggccgacgtgacgcccgtcaccctccggtcgtcggtc
gtcgatctccgggagaaccggacggagtaa
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