Halobaculum sp. CBA1158: Hbl1158_02355
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Entry
Hbl1158_02355 CDS
T08013
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_02355
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_02355
Prokaryotic type
Archaeal type
TFB
Hbl1158_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
UIP00232
LinkDB
All DBs
Position
468761..469780
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AA seq
339 aa
AA seq
DB search
MTGPTRQRENRERRQWTGSTESGEETRSERTEENADEETDGDAVDLEDIDEEDLVRTADG
ELMHEPTGLIVEEDNVDRGPEWRAFNHSERQSKSRVGAPVTETMHDKGLTTTIDWKDKDA
YGRSLSSEKRSQMHRLRKWQERIRTKDAGERNLQFALSETDRMASALGVPRSVREVASVI
YRRALDEDLIRGRSIEGVATATLYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYVSQE
LGLEMKPVDPKKYVPRFGSELELSEEVKSKANEIIETTAEQGLLSGKSPTGFAAAAIYAA
SLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcccacccgccagcgcgagaatcgcgagcgacgccagtggacggggagcacc
gaatcgggggaggagacacgatcggaacggaccgaagagaacgccgacgaggagaccgac
ggcgacgcggtcgacctcgaggacatcgacgaggaggacctcgtccgtacggccgacggc
gaactgatgcacgagccgaccgggctcatcgtcgaggaggacaacgtcgatcgaggaccg
gagtggcgggcattcaaccactccgagcgccagtcgaagtcccgcgtcggggcacccgtc
accgagacgatgcacgacaagggcctgacgaccaccatcgactggaaggacaaggacgcc
tacgggcggtcactctcctcggagaagcgctcgcagatgcaccgcctccgcaagtggcaa
gagcgcatccgcaccaaggacgccggcgagcgcaaccttcagttcgccctctcggagacc
gatcggatggcgagcgcgctgggcgtcccgcgctcggttcgggaggtcgcctccgtgatc
taccgccgcgcgctcgacgaggacctcatccgcgggcgctccatcgagggcgtcgccacg
gcgacgctgtacgccgcctgtcgaaaggagggcatcccccggtcgctcgaggagatatcg
gaggtatcgcgggtcgaacgcaaagagatcggccgcacctaccgctacgtctcccaggaa
ctcggcctggagatgaagcccgtcgacccgaagaagtacgtcccgcggttcggctcggaa
ctggagctcagcgaggaggtgaagtcgaaggccaacgagatcatcgagacgaccgccgag
cagggactgctctcgggtaagtccccgactgggttcgcggccgccgccatctacgcggcc
tccctgctgtgcaacgaaaagaaaacccagcgcgaggtcgccgacgtcgcccaagtcacc
gaagtcaccatccgaaaccgctatcaagagcagatcgaagccatgggcattcacagctga
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