Halobaculum sp. CBA1158: Hbl1158_03170
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Entry
Hbl1158_03170 CDS
T08013
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hacb
Halobaculum sp. CBA1158
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hacb03016
]
Hbl1158_03170 (truD)
Enzymes [BR:
hacb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Hbl1158_03170 (truD)
Transfer RNA biogenesis [BR:
hacb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hbl1158_03170 (truD)
Prokaryotic type
Hbl1158_03170 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UIP00386
LinkDB
All DBs
Position
complement(605506..606921)
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AA seq
471 aa
AA seq
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MREAHPRERATGVDFYVSDADGIGGRLRVAPEDFRVRERERMDPEPLDSDRGSYPHLLLR
ATLRRWDTNDFASALSDAMGASRERVSWAGTKDKHAVTTQLFTVRDADPEAIPDLDGADV
EVLGRTGRALEFGDLAGNEFAIRVRETEGDPAPITRDLRSFADADATEPAGSADDDSDDG
DDTDDDRAGDAAGDADPVACAVPNWFGHQRFGSHRPITHEVGLAAVRGDWRGAVLAYCGN
PYDTEPEDSQRAREVVEDQADGDDPNWSVALDAMPGRLRYERSMLHRLEEGADWRDALEA
VPSNLQRLFVNAAQSYVFNRILSERLRRGLPFTRPVEGDVVAFLERDTAFPKPDMDRLQR
ATEGRVDTLARHCERGRAFVTAPLVGTETELGEGEPGEIEREVLRELDVEPGDFELPGEF
ASSGTRRAVVLPTDLTVSEEEGDPVFEFALPSGSYATALLREYLKCDPERL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggcccacccccgcgagcgcgccaccggcgtcgacttctacgtcagcgacgcc
gacgggatcggcggccgcctccgcgtcgcgcccgaggacttccgggtccgcgagcgcgag
cgcatggaccccgagccgctcgattcggaccggggctcgtacccccatctcctcctgcgg
gccaccctgcgccgctgggacaccaacgacttcgcgagcgcgctgtcggacgcgatgggt
gcgagtcgcgagcgcgtctcgtgggccggcaccaaggacaaacacgccgtcacgacccaa
ctgttcacggtccgcgacgccgaccccgaggcgatcccggacctcgacggcgcggacgtc
gaggtgctcggcaggacgggccgcgcgctcgagttcggcgacctggccggcaacgagttc
gcgatccgggtgcgcgaaacagagggggacccggcaccgatcacccgcgacctccggtcg
ttcgccgacgccgacgcgaccgagccggccggctctgcggacgacgacagcgacgacggc
gacgacacggacgacgaccgcgcgggcgacgccgccggcgacgccgaccccgtcgcctgc
gcggttccgaactggttcggccaccagcgcttcgggagccatcgaccgatcacccacgag
gtcgggctcgcggccgtccgcggcgactggcgcggcgctgtgctggcgtactgcgggaac
ccctacgacaccgagcccgaggactcccaacgtgcccgcgaggtggtggaagaccaggcc
gacggcgacgacccgaactggtcggtcgccctcgacgcgatgccgggccgcctgcgctac
gagcgctcgatgcttcaccgactcgaggagggagccgactggcgcgatgcgctggaggcc
gtgccgtcgaacctccagcggctgttcgtcaacgccgcgcagtcgtacgtgttcaaccgg
atcctctccgagcgcctccgtcgcggcctcccgttcacccgtccggtcgagggcgacgtg
gtcgcgttcctcgagcgcgacacggcgttcccgaagcccgacatggaccgcctccagcgt
gcgaccgagggccgcgtcgacacgctcgcgcgccattgcgagcgcggacgggcgttcgtc
accgcgccgctcgtgggaaccgagacggaactcggggagggcgagccgggcgagatcgaa
cgcgaggtcctgcgggagctggatgtcgaaccgggcgacttcgaactgcccggcgagttc
gcctccagcggcacccgccgggccgtggtgctcccgaccgatctgacggtctccgaggag
gagggtgaccccgtgttcgagttcgcgctgccgtcgggctcgtacgcgacggcgttgctg
cgggagtatctgaagtgtgatccggagcggctgtaa
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