Halobaculum sp. CBA1158: Hbl1158_03360
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Entry
Hbl1158_03360 CDS
T08013
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hacb
Halobaculum sp. CBA1158
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hacb03032
]
Hbl1158_03360
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_03360
Enzymes [BR:
hacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hbl1158_03360
DNA replication proteins [BR:
hacb03032
]
Prokaryotic type
DNA Topoisomerases
Hbl1158_03360
DNA repair and recombination proteins [BR:
hacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hbl1158_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
HHH
DNA_pol_lambd_f
HHH_8
DUF4332
Binary_toxB_3
HEXIM
Toprim_4
Toprim_2
IMS_HHH_1
Motif
Other DBs
NCBI-ProteinID:
UIP00416
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Position
complement(635557..638121)
Genome browser
AA seq
854 aa
AA seq
DB search
MELIVTEKDNAARRLSEILSNGDFDTERRAGVNVYRWGGTRCIGLSGHVVAVDFPPEYDD
WRDVEPVELIDAPVRKRPTQEGIVRALRLLSRDADRVVIATDYDREGELIGKEAYELIRE
VNEDVPVDRVRFSSITENEVRGAFEDRDEIDFDLAAAGEARQIIDLIWGASLTRFLSLSA
RQLGDDFISVGRVQGPTLKLIVDREREIEAFDPEDYWELFADLLKRDGEEADPDEDGFDA
QYFYEDDDGTEAERVWDEATAEAVYDRLLEAESATVSSVRRRRRTDEPPAPFNTTQFIRA
ASSIGYSAQRAMSMAEDLYTAGFITYPRTDNTVYPEDLEERELLEELSMGREFGDDAESL
LELDDIEPTEGDEETTDHPPIHPTGELPAPSELSDDEWEVYELVVRRFLATCAPDAEWEH
LRVVTEVAAGESAAGVDDGPLRLKSNGKRLTEEGYHAVYPYFSTNESYVPDVSEGEALGI
VDTALEAKQTQPPRRYGQSRLIETMEDMGIGTKATRHDVIQKLYDRGYIESDPPRPTGLA
KAVVKASEEFADRIVSDEMTAQLEADMQAIASGKKEFDEVADESREMLSAVFDELAESRE
AVGDHLQKSLKADKQLGPCPECGDTLLVRKSRAGSYFVGCDGYPDCEYTLPLPSTGKPLI
LDEVCDDHGLNHVKMLAGRKTFVHGCPQCQADEADEEEDEVIGDCPECGESAAGSDSSEH
GGKLAIKRLRSGSRLVGCTRYPECEYSLPLPRRGEIEVTDETCEEHDLPHLVVHSGDEPW
ELGCPICNYREYQSRQAGSELEAIEGIGEKTAAKLKDAGIEDVSSLKETEPDALADELDG
VGPDTVRGWQAKAD
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatcgtcaccgagaaggacaacgccgcgcggcggctctcggagatcctctcg
aacggggacttcgacaccgagcggcgcgccggcgtcaacgtctaccgctggggcggcacc
cgctgcatcgggctgtcgggccacgtcgtcgcggtggacttcccgccggagtacgacgac
tggcgcgacgtggagccggtggagctgatcgacgcccccgtccgcaagcgccccactcag
gaggggatcgtccgcgcgctgcggctgctgtcgcgggacgccgaccgcgtcgtcatcgcg
accgactacgaccgcgagggcgagctgatcggtaaggaagcgtacgaactgatccgcgag
gtgaacgaggacgtgcccgtcgaccgcgtgcgcttctcctcgatcaccgagaacgaggtg
cgcggagcgttcgaggaccgcgacgagatcgacttcgacctcgcggcggcgggggaggcc
cgccagataatcgacctgatctggggggcgtcgctgacgcggttcctgtcgctgtctgcc
cgccaactgggcgacgacttcatctccgtcggccgggtgcaggggccgaccctcaagctg
atcgtcgaccgcgagcgcgagatcgaggcgtttgaccccgaggactactgggagctgttc
gccgacctgctgaaacgcgacggcgaggaggcggaccccgacgaggacggcttcgacgcg
cagtacttctacgaggacgacgacggcaccgaggccgagcgcgtctgggacgaggcgacc
gccgaggcggtgtacgaccggctgttggaggccgagtcggcgaccgtgtcgtcggtgcgt
cgccgtcggcggaccgacgagccgcccgcgccgttcaacacgacgcagttcatccgcgcg
gcctcctcgatcggctactccgcacagcgcgcgatgagcatggcggaggacctctacacg
gccgggttcatcacctacccgcgcacggacaacaccgtctaccccgaggacctggaggag
cgggagctgctggaggagctgtcgatgggtcgcgagttcggcgacgacgccgagtcgctg
ctggagcttgacgacatcgaaccgactgagggcgacgaggagacgaccgaccacccgccg
atccacccgaccggggagctcccggccccctcggagctctccgacgacgagtgggaggtg
tacgaactggtggtgcgacggttcctcgcgacgtgcgcgccggacgccgagtgggaacac
ctccgcgtcgtcaccgaggtcgccgccggcgagtcggccgcgggcgtcgacgacggcccg
ctgcggctgaagtccaacggcaagcggctcacagaggaggggtaccacgccgtgtacccg
tacttctcgaccaacgagagctacgtccccgacgtgtcggagggcgaggcgctggggatc
gtcgacacggccttggaggccaagcagacccagccgccgcgccggtacggccagtcccgg
ctcatcgagacgatggaggacatggggatcgggacgaaggcgacgcgccacgacgtgata
cagaagctgtacgaccgcggctatatcgagagcgacccgccccggccgaccggcctggcg
aaggcggtcgtgaaggccagcgaggagttcgccgaccgcatcgtgagcgacgagatgacc
gcccaactcgaggcggacatgcaggccatcgcctcggggaaaaaagagttcgacgaggtc
gccgacgagtcccgcgagatgctctctgcggtgttcgacgagctggccgagtcgcgagag
gcggtcggcgaccacctccagaagtcgctgaaggcggacaagcaactggggccgtgtccc
gagtgcggcgacaccctcctcgtgcgcaagtcgcgggcggggtcgtacttcgtcggctgc
gacggctaccccgactgcgagtacaccctcccgctgccgtcgacgggcaagccgctcatc
ctcgacgaggtgtgcgacgaccacgggctgaaccacgtgaagatgctcgcgggtcgcaag
acgttcgtccacggctgcccgcagtgtcaggccgacgaggccgacgaggaggaggacgaa
gtgatcggagactgccccgaatgtggggagagcgcggcgggaagcgactcgtcggaacac
ggcgggaagctcgcgatcaagcgcctgcgctccggctcgcggctcgtgggctgtacccgg
tatccggagtgcgagtactcgctgccgctgccgcgccgcggcgagatcgaggtgaccgac
gagacctgcgaggagcacgacctcccgcacctggtggtccactcgggcgacgagccgtgg
gagctgggctgtccgatctgcaactaccgggagtaccagtcccggcaggcggggtcggag
ctggaggcgatcgaggggatcggcgagaagaccgcagcgaaactgaaggacgccgggatc
gaggacgtctcctcgctcaaggagacggaaccggacgcgctcgcggacgaactcgacggc
gtcgggcccgacaccgtgcgcgggtggcaggcgaaggcggactga
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