Halobaculum sp. CBA1158: Hbl1158_03970
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Entry
Hbl1158_03970 CDS
T08013
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03420
Nucleotide excision repair
hacb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbl1158_03970
03430 Mismatch repair
Hbl1158_03970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_03970
Enzymes [BR:
hacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hbl1158_03970
DNA repair and recombination proteins [BR:
hacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbl1158_03970
MMR (mismatch excision repair)
Other MMR factors
Hbl1158_03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
UIP00527
LinkDB
All DBs
Position
complement(746317..748182)
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AA seq
621 aa
AA seq
DB search
MVMSDPTVTRLFGGPGSGKTTALLDRVEGLIDDGVAMRDILVVSYTRAAAAEVRERLTER
LDTTPRHLQGNVCTMHAKAYELLNLSRGDVVGEDDKEEFCDDYGVEYEDEYSGAGRRTAR
STTLGNKVIATSQWLQRTKRDVADWYDVPFQWDVEEVRLPPDIDPNAQEGNKYTPTWPSS
DERLDVPEAIRAWRAYKGDNELVGFADMLERVAQRSLVPTVDHLVIDEFQDITTLQYDVY
EEWKPHMESGLIAGDDDQVVYAWQGADPALLLDTEVDEDEVLPNSYRLPSNILNVVNTEI
RHIDKRQEKDLKPRKEGGTVEAIDSPSMLDLVRNVRHTIGSTDDETVMVLFRARYQMFDF
IDEFISEGIPFSCLTDQRMWTDRLGDYVSAVEAVERNEALTALEARRLADILQDSAFGSN
ERDELYDFLDDVEETAEEDDLAEIPLSPEDVKEYVPFMPDGPAAADMARKITSFQRKSMK
AYFAGEYEGEDPSRVRLGTIHSAKGREADHVFVNTDLTEKVVEQMAAQADQQGLDVTGRD
GEEFTKTTDPVPVLTDNERRVFYVGMSRARERLVLMENLVNGAPTLPISVVLHNELDERD
PQAIVDEIVEESEAPDPELEA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgagcgatccgacggtcacccgactgttcggcggtccgggcagcgggaagacg
accgcgctcctcgaccgggtcgaggggctcatcgacgacggcgtggcgatgcgcgatatc
ctcgtcgtctcgtacacccgagcggccgccgccgaggtgcgcgagcgactcaccgagcga
ctcgacaccacccctcgacacctgcaggggaacgtctgtacgatgcacgcgaaggcgtac
gagctgttgaacctctcgcgaggcgacgtggtcggcgaggacgacaaagaggagttctgt
gacgactacggcgtcgagtacgaggacgagtactccggcgcgggccgtcgcaccgcccgg
tcgacgacgctgggcaacaaggtgatcgccacctcccagtggctccagcggaccaagcgc
gacgtggccgactggtacgacgtccccttccagtgggacgtagaggaggtccgcctcccg
ccggacatcgaccccaacgcccaggaggggaacaagtacacgccgacgtggccctcctcg
gacgagcgcctcgacgtgcccgaggccattcgggcgtggcgcgcgtacaagggcgacaac
gagctggtcggcttcgcggacatgctcgagcgcgtggcccagcggtcgctcgttccgacg
gtcgaccacctcgtcatcgacgagttccaggacatcaccaccctccagtacgacgtgtac
gaggagtggaagccgcacatggaatcgggcctcatcgccggcgacgacgaccaggtcgtg
tacgcctggcagggcgcggacccggcgctgctgctcgacaccgaggtcgacgaggacgag
gtgttgcccaactcctaccggctcccgtcgaacatcctcaacgtcgtcaacacggagatc
cgtcacatcgacaagcgccaggagaaggacctcaagccccgcaaggagggagggaccgtc
gaggcgatcgactcgccgtcgatgctcgatctcgtgcggaacgtccgccacacgatcggc
tccaccgacgacgagacggtgatggtgctgttccgggcgcggtatcagatgttcgacttc
atcgacgagttcatctccgaggggatccccttctcgtgtctcaccgaccagcggatgtgg
accgaccggctcggcgactacgtcagcgcggtcgaggcagtcgagcgcaacgaggcgctc
accgccctcgaggcgcgccgactcgcggacatcctccaggactcggcgttcggctccaac
gagcgcgacgagctgtacgacttcctcgacgacgtggaggagaccgcagaggaggacgac
ctcgcggagatcccgctgtcgcccgaggacgtgaaagagtacgttccgttcatgcccgac
ggccccgccgccgccgacatggcccgcaagatcaccagcttccagcgcaagtcgatgaag
gcgtacttcgcgggcgagtacgagggcgaggaccccagccgggtccgcctcggcaccatc
cactccgcgaagggtcgcgaggccgaccacgtgttcgtcaacaccgacctcaccgagaaa
gtcgtcgagcagatggccgcccaggccgaccagcaggggctcgacgtgaccgggcgcgac
ggcgaggagttcacgaagacgaccgaccccgtccccgtgctcaccgacaacgagcgccgc
gtgttctacgtcggcatgtcgcgcgctcgcgagcggctcgtcctcatggagaacctcgtc
aacggggcaccgacgctgccgatctcggtcgtgctccacaacgaactcgacgagcgcgac
ccgcaggcgatcgtcgacgagatcgtcgaggagagcgaggcacccgaccccgaactcgag
gcgtag
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