Halobaculum sp. CBA1158: Hbl1158_04360
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Entry
Hbl1158_04360 CDS
T08013
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbl1158_04360 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_04360 (rpoB)
Enzymes [BR:
hacb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbl1158_04360 (rpoB)
Transcription machinery [BR:
hacb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbl1158_04360 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
UIP00600
LinkDB
All DBs
Position
815635..817461
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AA seq
608 aa
AA seq
DB search
MASTREAKVYVNGSLVGTHPDPNQLATQIREARRRGDVSDMVNVSVKDRTNEVIVNADAG
RARRPLIVVENGEPLLDDETIEAVENDEIEFEDLVDHGIVEFIDAEEEEDILVATDEEDV
GPKTTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTRQH
LLHYPQLSMVKTQTTEQIGFDERPAAQNFVVAVMSYEGFNIEDALVMNKGSVDRAMQRSH
FFRTYEGEERRYPGGQEDRFEVPSQDVRGARGEDAYTHLDEDGLVNPETKVDENSVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVVGHLAPQEDMPFTEDGLVPDLVLNPHALPSRMTVGHVLEMLGGK
VGSLEGRRVDGTAFQGEDEEELRDSLEEHGYKSSGKEVMYSGVTGEKIEAEIFVGTIFYH
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMEREVLIGHGAAMALKERLLD
ASDKETVYISEETGMVAVEDVEQRRIYDPITGDEDDIHEMEISYAFKLLLDEMKALGIRP
TLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacacgagaagcgaaagtctacgtcaacgggagcctggtcgggacccacccg
gacccgaaccagctcgccacacagatccgagaggcgcgccgacgcggcgacgtctccgac
atggtgaacgtctcggtgaaggaccggaccaacgaggtcatcgtcaacgccgacgccggc
cgcgctcgccggccgctcatcgtcgtcgagaacggcgagccgctgctcgacgacgagacg
atcgaggcggtcgagaacgacgagatcgagttcgaggacctcgtcgaccacggcatcgtc
gagttcatcgacgccgaggaggaggaggacatcctcgtcgccaccgacgaggaggacgtc
ggacccaagacgacgcacctggagatcgacccgcagctcatcttcggcatcggcgcgggc
atgatcccgtaccccgagcacaacgcctcgccccggattacgatgggggcggggatgatg
aagcagtcgctcgggctgccgtcggcgaactaccgcatccggccggacacgcgccagcac
ctcctgcactacccgcagctgtcgatggtcaagacccagaccaccgaacagatcgggttc
gacgagcgccccgcggcgcagaacttcgtcgtcgcggtcatgtcctacgagggattcaac
atcgaggacgcgctcgtcatgaacaaggggagcgtcgaccgcgcgatgcagcgctcgcac
ttcttccgcacctacgagggcgaggagcgccgctaccccggcggccaggaggaccgcttc
gaggtcccctcccaggacgtgcgcggcgctcgcggcgaggacgcgtacacgcacctcgat
gaggacggcctcgtcaaccccgagacgaaggtggacgagaactccgtgctgctcggaaag
acgtcgccgccgcggttcctggaggagcccgacgacatgggcggcctctccccgcagaag
cggcgtgagaccagcgtcacgatgcgctcgggcgagtccggcgtcgtcgacacggtgacg
ctgatggagggcgaggacggatccaagctctcgaaggtctcggttcgcgacgagcggatc
cccgagctcggggacaagttcgcgtcccggcacggccagaagggcgtcgtcggccacctg
gccccgcaggaggacatgccgttcaccgaggacggcctcgttcccgacctggtgctcaac
ccgcacgcgctcccgtcgcggatgacggtgggccacgtgctggagatgctcggcggcaag
gtcggctcgctggagggccgccgcgtcgacgggacggcgttccagggcgaagacgaggag
gaactgcgcgactcgctggaggagcacggctacaagtcctccgggaaggaggtcatgtac
tcgggcgtcaccggcgagaagatcgaggcagagatcttcgtcgggacgatcttctaccac
aagctgtaccacatggtgagcaacaagctgcacgcccgctcgcgcggacccgtgcaggtg
ctcacccgccagccgacggaggggcgtgcccgcgagggcggcctccgcgtcggcgagatg
gagcgcgaggtgctcatcggacacggggcggcgatggcgctgaaggagcgcctgctcgac
gcctccgacaaggagacggtgtacatctccgaggagacggggatggtggccgtcgaggac
gtggagcagcgtcggatctacgaccccatcacgggcgacgaggacgacatccacgagatg
gagatcagctacgcgttcaagctgttgctcgacgagatgaaggcgctcggcattcggccc
accctcgaactggaggacgcggtctaa
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