Halobaculum sp. CBA1158: Hbl1158_04370
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Entry
Hbl1158_04370 CDS
T08013
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbl1158_04370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_04370
Enzymes [BR:
hacb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbl1158_04370
Transcription machinery [BR:
hacb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbl1158_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Intein_splicing
LAGLIDADG_3
PAP1
DUF2835
LAGLIDADG_WhiA
CMAS
Motif
Other DBs
NCBI-ProteinID:
UIP00602
LinkDB
All DBs
Position
820391..823123
Genome browser
AA seq
910 aa
AA seq
DB search
MTDAGSVDRFVDAHESVTEDIALVVEDTELPRRLKNEIYENIDGRGGVTAEQANEIAQAA
ESRYLDTRVDPLDPVGTVSAQSIGEPGTQMSVPADERVVIRRGGETDVTEIGPLVDRLME
SQDVREIDGHEVALAPDELEVPSLREDEQVEWKPVEEVSRHETPDELLRFELESGRTIRA
TKAHSFVTRRDNEVVPVAGDELDEGDWLPVVADVGASADAPETVDVREHLSAEDYWFTST
LTDGGAAATDGTFPVGDEQVANKRNSLDAGEIEEGYAYPVGGNVGLPEELPLDETTGFFV
GAFLAEGNLTDYYVSVSNVDAEFQERVRAFAERFDLSVNEYENTSGFADSYDIRVNGTVL
ADLLCATCTEGGEKVVPGFAFGAPDEFVRALLRGYFSGDGNVGRNSIRASSVSNRLTAGV
ALLLSRVGVYATLGETDDSRTLRIPAKHVRRFNERVGIVGERGDELAELAATVDPDGPDA
TDQIPNFGDALGEVAADAGIPSRQVNAASNRQRIGRNRLAHFVDEATEAGVDSAALADLE
RAVDCDVVWDRIASIEAVESDHEHVYDFSVEGLETFTTAEGVITHNTMNTFHYAGVAEMD
VTQGLPRLIELVDARKTPDTPIMVVHLDDEHATDREKAHEVVWQLEATKILALGDVSTNV
ADMVVSVDLNEETLLERWPTHDDPTEVAGIVADTIEDSLGVSTRHSGTNIQFGPDEPSYR
QLLQLVEQLREIVFKGIEEVTRVVIRKEEVDDGDEEYVLYTEGSAFADALEIEGVDASRT
TCNNIHEIYRTLGVEAARETIINETMETLEEQGLDDVNIRHLMLVSDIMTNRGTVESIGR
HGISGSKDSVLARAAFEVTVNHLLDAAIHGEADDLNGVIENVIVGKPVSIGTGDVDLRMG
SAPDPKSADD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccggctcggtcgaccgcttcgtcgacgcccacgagtcggtcaccgaggac
atcgcgctcgtcgtcgaagacacggagctcccgcggcggctgaagaacgagatctacgag
aacatcgacggccgcggcggcgtgaccgccgagcaggccaacgagatcgcccaggccgcc
gagtcgcgctacctcgacacgcgcgtcgacccgctggaccccgtgggaacggtgagcgct
cagagtatcggcgagcccgggacgcagatgagcgtccccgccgacgagcgcgtcgtcatc
cgtcgcggcggtgaaacggacgtgaccgagatcggcccgctcgtcgaccggctcatggag
tcgcaggacgttcgcgagatcgacggccacgaggtcgcgctcgcgcctgacgaactggag
gtcccgagcctccgcgaggacgagcaggtcgaatggaaacccgtcgaggaggtcagccgc
cacgagacgcccgacgagttgctgcggttcgaactggagtcgggacggacgatccgcgcg
acgaaggcgcactcgttcgtcacccggcgtgacaacgaggtcgtcccggtcgccggcgac
gaactggacgagggcgactggcttcccgtcgttgcagacgtgggcgcgtccgcggacgca
ccggagacggtcgacgtccgtgaacacctctcggccgaggactactggttcacgtcgacg
ctgacggacggcggtgcggcggccacggacgggacgttccctgtgggcgacgagcaggtc
gccaacaagcggaactcgctcgacgctggcgagatcgaagaggggtacgcgtaccctgtc
ggcggtaacgtcggtctgcccgaggaactcccgcttgacgaaacaaccggattcttcgtc
ggcgcgttcctcgccgagggtaacctgacggactactacgtgtcggtctcgaacgtcgac
gccgagttccaagaacgagtccgtgcgttcgcggagcggttcgacctctcggtgaacgag
tacgagaacacgagcggcttcgcggacagctacgacatccgcgtgaacgggacggtgctc
gcggacctgctgtgtgcgacgtgtaccgagggcggcgagaaagtcgtccccggcttcgca
ttcggcgcacccgacgagttcgtccgcgcgctgcttcgcggctacttcagcggcgatggg
aacgtgggaaggaactcgatccgagccagctcagtcagcaaccgactcaccgcaggtgtc
gcgctgctgctgtcgcgggtcggcgtctacgccacgctcggtgagaccgatgactcgcgt
acgcttcggattcccgcgaagcacgtccggcggttcaacgagcgtgtcggaatcgtcggc
gaacgcggcgacgaacttgccgaactggccgcgacggtcgacccggacggtccggacgcg
accgaccagatcccgaacttcggtgacgcgcttggggaggtcgcagcggacgccggcatc
ccgagcagacaggtgaacgctgcctccaaccgccagcggatcggccgtaatcgcctcgcc
cacttcgtcgacgaagccaccgaggccggtgtcgactcagcagcgctcgccgacctcgaa
cgggcagttgactgcgacgtggtctgggaccgaatcgcctcgatcgaggcggtcgagagc
gaccacgagcacgtgtacgacttctccgtcgagggactggagacgttcaccaccgccgag
ggcgtcatcacacacaacacgatgaacacgttccactacgcgggcgtcgcggagatggac
gtgactcaggggctgccgcggctcatcgagctggtggacgcccggaagacgccggacacg
ccgatcatggtcgtccacctcgacgacgagcacgccaccgaccgcgagaaggcccacgag
gtcgtctggcagctggaggcgacgaagatcctcgcgctgggcgacgtgtcgaccaacgtc
gcggacatggtcgtcagcgtcgacctcaacgaggagacgctgctggagcggtggccgacc
cacgacgacccgaccgaggtcgccggtatcgtcgccgacaccatcgaggactcgctgggc
gtcagcacgcgccactcgggaacgaacatccagttcggccccgacgagccgagctaccgc
cagctgctccagttagtcgaacagctgcgcgagatcgtgttcaaggggatcgaggaggtg
acccgcgtcgtcatccgcaaggaggaggtggacgacggcgacgaggagtacgtcctctac
accgaggggtcggcgttcgccgacgccctggagatcgagggcgtcgacgcctcgcggacg
acgtgtaacaacatccacgagatctaccggacgctcggcgtcgaggccgcccgcgagacc
atcatcaacgagacaatggagacgctcgaggagcagggcctcgacgacgtgaacatccgc
cacctgatgctcgtctcggacatcatgacgaaccgcggcaccgtcgagtcgatcggtcgc
cacggcatctccgggtcgaaggactccgtgctcgcgcgcgcggcgttcgaggtgacggtg
aaccacctgctcgacgccgcgatccacggcgaggcggacgacctcaacggcgtcatcgag
aacgtcatcgtcgggaagcccgtctcgatcggcaccggcgacgtggacctccggatgggc
tctgcgcccgacccgaagtccgcggacgactga
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