KEGG   Halobaculum sp. CBA1158: Hbl1158_05160
Entry
Hbl1158_05160     CDS       T08013                                 
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
  KO
K03265  peptide chain release factor subunit 1
Organism
hacb  Halobaculum sp. CBA1158
Pathway
hacb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hacb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Hbl1158_05160 (prf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hacb03019]
    Hbl1158_05160 (prf1)
   03012 Translation factors [BR:hacb03012]
    Hbl1158_05160 (prf1)
Messenger RNA biogenesis [BR:hacb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     Hbl1158_05160 (prf1)
Translation factors [BR:hacb03012]
 Eukaryotic type
  Release factors
   Hbl1158_05160 (prf1)
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 acVLRF1 baeRF_family10
Other DBs
NCBI-ProteinID: UIP00749
LinkDB
Position
complement(969101..970366)
AA seq 421 aa
MSSDAEEGQPNEDRRKYEFRKVLDELDDFEGSGTQLVTIYIPEDKQVSDVVAHVTQEHSE
ASNIKSKQTRTAVQDALTSIKDRLRYYDTYPPDNGIVIFSGAVDSGGGQTEMVTKVLESP
PEPIQSFRYHCDSNFLTGPLEDMMSDKGLFGLIVLDRREANVGWLKGKRVEAVKSASSLV
PGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLMVDKRHELEGILVGGPSPTKDEFL
DGDYLHHELQDLVLGKFDVAYTDESGLHDLVDAADEVLANQEVLKDKREMEEFFEKLHTG
EEATYGFEQTRRNLVMGSVDRLLVSEDLHHDVIPYECPNGHEEREIVERRHSTPDHECTE
CGETVPASEAGEREDAVEHLMNIAEQRGTDTKFISTDFEKGEQLMDAFGGVAGILRYSTG
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcagcgacgccgaagaggggcaacccaacgaggacagacggaagtacgagttccgg
aaggtcctcgacgaactcgacgacttcgaggggtcgggaacccaactcgtcacgatctac
atccccgaggacaagcaggtctccgacgtggtcgcacacgtcacccaggagcacagcgag
gcgtccaacatcaagtccaaacagacccgaacggccgtgcaggacgcgctcaccagcatc
aaggaccgcctgcgctactacgacacctacccaccggacaacggcatcgtgatcttctcg
ggcgcggtcgactccggcggcgggcaaaccgagatggtgaccaaggtgctggagtcgccg
cccgagccgatccagtcgttccgctaccactgcgattcgaacttcctgaccgggccgctc
gaggacatgatgtccgacaagggcctgttcgggctcatcgtcctcgaccgccgcgaggcg
aacgtcggctggctcaagggcaagcgcgtcgaggcggtcaagtcggcctcctcgctggtt
cccggcaagcagcggaagggtggccagtccgcccaacgcttcgctcgactccgcctggag
gctatcgacaacttctaccaggaggtcgcggggatggccaacgacctgatggtcgacaag
cgccacgagctcgagggcatcctcgtgggcggtccctcgcccacgaaagacgagttcctc
gacggcgactacctccaccacgagctccaagacctcgtcctcgggaagttcgacgttgcc
tacaccgacgagtccggcctgcacgacctcgtcgacgccgccgacgaggtgctcgccaac
caggaagtgctcaaggacaaacgcgagatggaggagtttttcgagaagctccacaccggc
gaggaggccacctacggcttcgagcagacccgccgaaacctcgtgatgggttcggtcgac
cggctcctcgtctcggaggacctccaccacgacgtgatcccctacgagtgtcccaacggg
cacgaggaacgcgagatcgtcgaacgccgacactccacgcccgatcacgagtgtaccgag
tgcggcgagacggtcccagccagcgaggccggcgagcgcgaggacgccgtcgagcacctc
atgaacatcgccgaacagcgcggcaccgacacgaagttcatctccaccgacttcgagaag
ggcgaacagctcatggacgccttcggcggcgtcgccggcatcctccgctactcgaccggc
gtttga

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