Halobaculum sp. CBA1158: Hbl1158_05800
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Entry
Hbl1158_05800 CDS
T08013
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_05800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_05800
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_05800
Prokaryotic type
Archaeal type
TFB
Hbl1158_05800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
HTH_Tnp_ISL3
A2L_zn_ribbon
DZR_2
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
UIP00869
LinkDB
All DBs
Position
complement(1098396..1099394)
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AA seq
332 aa
AA seq
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MSENTNTRRRPAGRERRTAHEHESESEEERQSGDELACPECSGNVIQDEEHGETVCEECG
LVIEEDSVDRGPEWRAFDAAEKDQKSRVGAPTTNTMHDKGLSTNIDWRDQDAYGRSLGAR
QRQKMRRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDED
LLPGRSIEGVSTACVYAAARMAGVPRSLDEISDVSRVEKDEVARTYRYVVRELKLEVKPA
DPEQYVPRFASSLELSEESEMRAKQLLRNAKDKGVHSGKSPVGLAAAAVYAAALLTNEKT
TQAAVSEVADISEVTIRNRYHELLEAEDGLVA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacaccaacacccgacgccgacccgccgggcgcgaacgacgaacagcacac
gaacacgaatccgaatccgaagaggaacggcagtccggcgacgagttggcctgtccggag
tgctccggtaacgtcatccaggacgaggaacacggcgagaccgtctgcgaggagtgcggc
ctcgtcatcgaggaggactccgtcgaccgcggtcccgagtggcgcgccttcgacgccgcc
gagaaggaccagaagtcccgcgtcggtgccccgaccacgaacacgatgcacgacaagggg
ctgtcgaccaacatcgactggcgcgaccaggacgcctacgggcgctcgctgggcgcgcgc
cagcgccagaagatgcgccgcctgcgcaagtggaacgagcgcttccgcacccgcgactcc
aaggagcgcaacctcaagcaggccctcggcgagatcgaccgcatggcgtcggcgctgggg
ctcccggacaacgtccgcgagaccgcctccgtcatctaccgccgtgcgctcgacgaggac
ctcctgccgggccgctccatcgagggcgtctccaccgcctgcgtgtacgccgccgcccgg
atggccggcgtcccgcgcagcctcgacgagatcagcgacgtatcgcgcgtcgagaaggac
gaggtcgcgcgcacgtaccgctacgtcgtccgtgaactgaagctcgaggtcaagcccgcc
gaccccgagcagtacgtcccgcggttcgcctcctcgcttgaactctcggaggagtcggag
atgcgcgcgaaacagcttctgcgcaacgccaaggacaagggcgtccactcgggcaaatcg
cccgtcggcctcgccgccgcggccgtctacgccgccgcgctgctcaccaacgagaagacg
acgcaggcggcggtctcggaggtcgccgacatctccgaggtcaccatccgcaaccgctat
cacgagctgctggaggccgaggacggcctcgtcgcgtag
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