Halobaculum sp. CBA1158: Hbl1158_07905
Help
Entry
Hbl1158_07905 CDS
T08013
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_07905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_07905
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_07905
Prokaryotic type
Archaeal type
TFB
Hbl1158_07905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_PaaD
Sigma70_r4
Zn_ribbon_RPB9
Cyclin_C
Trm112p
Anti-TRAP
HTH_Tnp_ISL3
A2L_zn_ribbon
Zn_ribbon_Top1
Zn_ribbon_LysW
Cyclin_N
Zn_ribbon_3
DUF7129
DUF8106
Zn_ribbon_RRN7
Zn_ribbon_tTFIIB
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UIO98489
LinkDB
All DBs
Position
1505584..1506561
Genome browser
AA seq
325 aa
AA seq
DB search
MSENVRSYTDERTRDDTTTEETDGEREQVECPECGGHLVNDSERGETVCRDCGLVVEEDE
IDRGPEWRAFDASEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKMQR
LRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALEEDLLPGRSI
EGVATSSLYAAARQAGTPRSLDEIANVSRVDKDEIARTYRYVVRELNLEIQPADPESYVP
RFASDLDLSDESERRARGLLQTAKREGVHSGKSPVGLAAAAVYAASLLTNEKVTQSEVSE
VANISEVTIRNRYHELLEAEEQVEV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaacgtccgaagttacacggacgagcggacccgggacgatacgactaccgag
gaaaccgacggcgagcgcgagcaggtggagtgccccgagtgcggcgggcacttggtgaac
gactccgaacgcggggagacggtgtgtcgcgactgcggactcgtcgtcgaggaggacgag
atcgaccgcggccccgagtggcgcgccttcgacgcgagcgagaaggacgagaagtcccgc
gtcggtgccccgacgacgaacatgatgcacgacaaggggctgtcgacgaacatcggctgg
caggacaaggacgcctacggcaattccctgtcgagccgccagcgcgagaagatgcagcgg
ctgcgcacgtggaacgagcgcttccgcacccgcgactccaaggagcgcaacctcaagcag
gccctcggcgagatcgaccgcatggcgagcgcgctgggcctgccggacaacgtccgcgag
acggcgtcggtcatctaccgtcgcgcgctcgaggaggacctcttgccgggccgctccatc
gagggcgtcgccacctccagcctgtacgcggccgcccgacaggcggggaccccgcggtcg
ctggacgagatcgcgaacgtctcccgggtcgacaaggacgagatcgcccggacgtaccgg
tacgtggtccgggagctgaacctggagatccagccggccgatcccgagagctacgtcccg
cggttcgcctccgatctcgacctctcagacgagtcggaacgacgggcgcgtgggctcctc
cagacggcgaaacgggagggcgtacactcggggaaatcgcccgtgggcctcgccgcggcc
gccgtctacgccgcctcgctgctcaccaacgagaaggtgacccaaagcgaggtcagcgag
gtggcgaacatctcggaggtcaccattcgaaaccggtatcacgaactgctcgaggccgaa
gagcaggtcgaagtgtag
DBGET
integrated database retrieval system
