Halobaculum sp. CBA1158: Hbl1158_08430
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Entry
Hbl1158_08430 CDS
T08013
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Hbl1158_08430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hacb03019
]
Hbl1158_08430
03009 Ribosome biogenesis [BR:
hacb03009
]
Hbl1158_08430
04131 Membrane trafficking [BR:
hacb04131
]
Hbl1158_08430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hacb04147
]
Hbl1158_08430
Messenger RNA biogenesis [BR:
hacb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Hbl1158_08430
Ribosome biogenesis [BR:
hacb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Hbl1158_08430
Membrane trafficking [BR:
hacb04131
]
SNARE
SNARE associated proteins
Others
Hbl1158_08430
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Hbl1158_08430
Exosome [BR:
hacb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hbl1158_08430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_14
AAA_33
AAA_22
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_lid_PRS2_C
AAA_7
Mg_chelatase
IstB_IS21
DUF815
AAA_3
NB-ARC
Sigma54_activat
SLFN-g3_helicase
Parvo_NS1
Zeta_toxin
ABC_tran
AAA_18
TsaE
AAA_17
AAA_30
AAA_11
PhoH
AAA_19
AAA_24
ATPase_2
bpMoxR
Vps4_C
Bac_DnaA
Zot
Motif
Other DBs
NCBI-ProteinID:
UIO98584
LinkDB
All DBs
Position
complement(1600214..1602475)
Genome browser
AA seq
753 aa
AA seq
DB search
MKLTVKPLKQKDAGRRLAAIDRVAAEELDLSGGDYIRIEGDSTAIARVWPGYPEDDNTGV
VRIDGQLRQEAGVGIDDRVTIEAADVEPADRITIALPQQFGIRGNVGSIIRDKLSGQPVT
QGQTIRFPLGLGLMGGGSQAVPLKIASTEPTGTVVITDSTEVDISEKPAEQIAESATGGG
AETPDVAYEDIGGLDDELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIA
KAVANEIDAHFQTLSGPEIMSKYYGESEEQLREVFEEAAENAPAIIFMDELDSIAPKREE
AGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEIGVPDRD
GRKEILQVHTRNMPLSEDIDIDEYAETTHGFVGADIASLAKEAGMNAIRRIRPQIDLDED
EIDAEILESIEITSRDMKEALKGIEPSALREVFVEVPDVTWGDVGGLEGTKERLRETIQW
PLDYPEVFEQMDMESAKGVLMYGPPGTGKTLLAKAVANESESNFISVKGPELLNKYVGES
EKGVREIFSKARENSPTIVFFDEIDAIATERGSNSSDSGVSERVVSQLLTELDGLETLED
VVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEDGRRKIFEVHTDHKPLADDVDLNALA
RRTEGYVGADIEAVCREASMNASREFIQSVSPEEVDDSVGNVRVTMAHFEDALDEVNPSV
TDETRQRYEEIEQRFQSTEPREQSETELGRTFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacagtcaaaccgctgaaacagaaggacgccgggcgtcgcctggccgctatc
gaccgcgtcgccgccgaggaactcgatctctcgggcggggactacattcgaatcgagggc
gactccacggcgatcgcccgcgtctggccggggtatccggaggacgacaacacgggcgtc
gtccgtatcgacggtcaactccgccaggaggccggcgtcggtatcgacgacagagtgacg
atcgaggccgcggacgtagagcccgccgaccggatcacgatcgcgctcccgcagcagttc
gggatacgcggcaacgtcggctcgatcatccgcgacaagctctcgggccagccggtcacg
caggggcagaccatccggttccccctcggactcgggctcatgggcggcggctcgcaggcc
gtcccgctgaagatcgcgtccaccgagccgaccggtaccgtcgtcatcaccgactcgacg
gaggtcgacatctccgagaagcccgccgaacagatcgccgagtcggcgacaggcggcggc
gcggagacgccggacgtcgcctacgaggacatcggcggcctcgacgacgaacttgagcag
gtgcgcgagatgatcgagctgccgatgcggcacccggagctgttcaagcgcctcggtatc
gagccgccgaagggcgtgctcctccacggcccgccgggcacggggaagacgctgatagcg
aaggccgtcgccaacgagatcgacgcgcacttccagacgctctcgggccccgagatcatg
tcgaagtactacggggagtccgaggagcaactgcgtgaggtgttcgaggaggccgccgag
aacgcccccgcgatcatcttcatggacgaactggattccatcgcgcccaagcgcgaggag
gccggcggcgacgtggaacgccgcgtcgtggcccaactgctctcgctgatggacgggctc
gaggagcgcggcgaggtcgtcgtcatcggcgcgaccaaccgcgttgacgccatcgacccg
gcgctgcgccgcggcggtcgcttcgaccgcgagatcgagatcggcgtgcccgaccgcgac
ggccgcaaggagatcctccaggtccacacccggaacatgccgctgtcggaggacatcgac
atcgacgagtacgccgagaccacccacggcttcgtcggcgcggacatcgccagcctggcg
aaggaggctgggatgaacgccatccgtcgtatccggccacagatcgacctcgatgaagac
gagatcgacgcggagatcctcgagtcgatcgagatcacgagccgcgacatgaaggaggcg
ctgaagggcatcgagccgtccgcgctccgggaggtgttcgtcgaggtgcccgacgtgacg
tggggcgacgtgggcggactcgagggcaccaaagagcggctccgcgagacgatccaatgg
cccctcgactaccccgaggtgttcgagcagatggacatggagtcggccaagggcgtactg
atgtacggcccgccggggacggggaagaccctgctggcgaaggccgtcgccaacgagtcc
gagtccaacttcatctcggtgaaggggccggagctgttgaacaagtacgtgggcgagtcc
gagaagggcgtccgcgagatcttcagcaaggcgcgcgagaactcgccgacgatcgtcttc
ttcgacgagatcgacgcgatcgcgaccgagcgcgggagcaactccagcgactcgggcgtc
tccgagcgcgtcgtctcccagctcctcaccgaactcgacggtctcgagacgctggaggac
gtggtcgtcatcgcgaccacgaaccgtccggacctcatcgacagcgcgctgcttcgcccg
ggacggctcgaccggcacgtccacgtccccgtccccgacgaggacggccgccggaagatc
ttcgaggtccacacggaccacaagccgctggcggacgacgtggacctcaacgcgctggcg
cgccggaccgagggatacgtcggggccgacatcgaagccgtctgccgcgaggcgtcgatg
aacgcctcgcgggagttcatccagtcggtctcgcccgaagaggtcgacgattccgtcggc
aacgtccgcgtgacgatggcccacttcgaggacgccctggacgaggtgaacccctccgtc
accgacgagaccagacagcgctacgaggagatcgaacagcggttccagagcacggaaccc
cgcgagcagtccgagaccgaactgggtcggaccttccagtag
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