Halobaculum sp. CBA1158: Hbl1158_09315
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Entry
Hbl1158_09315 CDS
T08013
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03030
DNA replication
hacb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hbl1158_09315 (fen)
03410 Base excision repair
Hbl1158_09315 (fen)
03450 Non-homologous end-joining
Hbl1158_09315 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hacb03032
]
Hbl1158_09315 (fen)
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_09315 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hacb04147
]
Hbl1158_09315 (fen)
DNA replication proteins [BR:
hacb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Hbl1158_09315 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Hbl1158_09315 (fen)
DNA repair and recombination proteins [BR:
hacb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
Hbl1158_09315 (fen)
Exosome [BR:
hacb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hbl1158_09315 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
OrfB_IS605
HHH_5
SVIP
Motif
Other DBs
NCBI-ProteinID:
UIO98742
LinkDB
All DBs
Position
1773674..1774651
Genome browser
AA seq
325 aa
AA seq
DB search
MGNADLRDIAHIEDVAFGEVSGVVAVDAHNWLYRYLTTTVKFTSDRRYTTEAGEEVANLI
GIVQGLPKFLENDLTPVFVFDGGVTDMKDDEVAKRREARERAEERRQEAQERGDSVEAAR
LEARTQRLTDTIHETSRELLRLLDVPVVEAPAEGEAQCAHMNRVGDADYSGSEDYDTLLF
GGPRTLRQLTSKGDPELMDLEATLADHDITREQLVDAAMLCGTDFNEGVRGIGPKTALAA
VKEHGDLFAVLEARDAEIPNAERVREFFHSPPVTDDYDLDTSITPDVDAARAYVVEEWEV
DPQEVERGLERIDEALTQTGLDDWA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcggatctccgtgacatcgcgcacatcgaggacgtcgccttcggggaggtc
tccggcgtcgtcgcggtcgacgcgcacaactggctgtaccgctacctcacgacgacggtg
aagttcacgagcgaccgccgctacaccacggaggccggcgaagaggtcgccaacctcatc
ggcatcgtgcaggggctgccgaagttcctcgagaacgacctcacgcccgtcttcgtcttc
gacggcggcgtcaccgacatgaaagacgacgaggtggccaagcggcgcgaggcccgggag
cgggccgaggagcgccgacaggaggcccaagagcgcggcgactccgtcgaggccgcacgg
ctggaggcgcgcacccagcgtctcaccgacaccatccacgagacctcccgcgaactgctc
cgcctgctcgacgtgcccgtcgtcgaggctccggcggagggcgaagcgcagtgtgcacac
atgaaccgcgtcggcgacgccgactactcgggcagcgaggactacgacacgctgctgttc
ggcgggccgcgaacgctccgacagctcacctccaagggcgacccggagctgatggacctg
gaggcgaccctcgcggaccacgacatcacccgcgagcagctcgtcgacgccgcgatgctg
tgcgggacggacttcaacgagggcgtccgcggcatcgggccgaagaccgccctcgctgcg
gtgaaggagcacggcgacctgttcgcggtgctggaggcccgcgacgcggagatcccgaac
gccgagcgcgtccgggagttcttccactcgccgccggtcaccgacgactacgacctcgac
acgtcgatcacccccgacgtcgacgccgcccgcgcgtacgtcgtcgaggagtgggaggtc
gaccctcaggaggtcgagcgcggcctcgaacgcatcgacgaggcgctgacgcagaccggg
ctcgacgactgggcgtag
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integrated database retrieval system
