Halobaculum sp. CBA1158: Hbl1158_09540
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Entry
Hbl1158_09540 CDS
T08013
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hacb
Halobaculum sp. CBA1158
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_09540
Enzymes [BR:
hacb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Hbl1158_09540
DNA repair and recombination proteins [BR:
hacb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Hbl1158_09540
Prokaryotic type
Hbl1158_09540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
UIO98783
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Position
1822278..1823870
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AA seq
530 aa
AA seq
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MRLFWHRRDLRVADNLGLAAAVDAAARRDPDADGDTEADGGTVARDDTDADGDGDSEGTG
DGAVLPVFVFDDDVLAHGSNPRVRFMLDALAELRDEYRERDSDLVLARGDPAEVLPDLAA
EHDAEAVVWNEDYSGLARERDARVRMALDDAGIDRETHHDAVHHEPGTITTNDGDPYSVF
TYFGRKWHDREKDDPVDPPAAADLVEREALEGSAGDPPTIGDLPTIDDLGFAEPEADVQA
AGTAAARERLAAFCEDAIFGYEEDRDYPARDATSRLSTDLKWGTIGVREVYAATEDAMRE
AEARDEGRDGTPAVDAVEEFRSQLAWREFYTQVLWANPEVVTANYKEYEREIGWRDGDDA
MADLEAWKEGRTGYPIVDAGMRQLREEAYMHNRVRMIVASFLTKDLLIDWRHGYDHFRER
LADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDAEYIKRYVPELDGVSPEN
VHSWHELSVGRRRQLAPEYPDPIVEHAEMREAAISMFERARGDDEAADAD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttctggcacaggcgggacctacgcgtcgccgataacctcgggctcgcggcc
gcggtcgatgccgccgcgaggagggaccccgacgcggacggcgacaccgaggcggacggc
ggcaccgtcgcgagggacgacaccgacgcggacggcgacggcgactccgaaggcaccggc
gacggcgcggtcctgccggtgttcgtgttcgacgacgacgtgctggcgcacgggtcgaac
ccgcgagtccgattcatgctcgacgcgctggcggagctgcgcgacgagtaccgcgagcgc
gactcggacctcgtcctcgcccgcggcgaccccgccgaggtgctccccgacctcgcggcc
gaacacgacgccgaggcggtcgtctggaacgaggactactccgggctggcccgcgagcgc
gacgcccgcgtccggatggcgctcgacgacgccgggatcgaccgcgagacgcaccacgac
gccgtccaccacgaaccgggaacgatcacgacgaacgacggcgacccgtactcggtgttc
acctacttcgggcggaagtggcacgatcgggagaaggacgacccggtcgatccgcccgct
gccgccgacctcgtcgagagggaggccctcgaggggtcggccggcgatcccccgacgatc
ggcgaccttccgacgatagacgacctcgggttcgccgagcccgaggcggacgtgcaggcc
gccggcaccgccgcggctcgcgagcgcctcgccgcgttctgcgaggacgccatcttcggc
tacgaggaggatcgcgactacccggctcgggacgcgacctctcgtctgtcgaccgatctc
aagtgggggacgatcggcgtccgtgaggtgtacgcggcgaccgaggacgcgatgcgcgag
gccgaggcgcgcgacgaggggcgcgacgggacacccgccgtcgacgccgtcgaggagttc
cggtcccagctggcgtggcgggagttctacacgcaggtgctgtgggccaatcccgaggtc
gtgacggcgaactacaaggagtacgagcgggagatcgggtggcgagacggcgacgacgcg
atggccgaccttgaggcgtggaaggagggccggaccggctacccgatcgtcgacgccggg
atgcgccaactgcgcgaggaggcgtacatgcacaaccgcgtgcggatgatcgtcgccagc
ttcctcacgaaggacctgctgatcgactggcgacacggctacgaccacttcagggagcgc
ctcgccgaccacgacaccgccaacgacaacggcgggtggcagtgggccgcctcgaccggc
acggacgcccagccgtacttccggatcttcaaccccatgacgcagggcgagcgctacgac
cccgacgccgagtacatcaagcggtacgtgccggagttggatggggtctcacccgagaac
gtccactcctggcacgagctgtcggtcggtcgacggcgacagctcgcccccgagtacccc
gacccgatcgtcgaacacgccgagatgcgcgaggccgcgatctcgatgttcgagcgcgcc
cgcggcgacgacgaggccgccgacgccgactga
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