Halobaculum sp. CBA1158: Hbl1158_10555
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Entry
Hbl1158_10555 CDS
T08013
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hacb
Halobaculum sp. CBA1158
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hacb03032
]
Hbl1158_10555 (gyrB)
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_10555 (gyrB)
Enzymes [BR:
hacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Hbl1158_10555 (gyrB)
DNA replication proteins [BR:
hacb03032
]
Prokaryotic type
DNA Topoisomerases
Hbl1158_10555 (gyrB)
DNA repair and recombination proteins [BR:
hacb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hbl1158_10555 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UIO98974
LinkDB
All DBs
Position
1997500..1999434
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AA seq
644 aa
AA seq
DB search
MSGSGNSEYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCD
EIEVTVHDDGSVSVSDDGRGIPVDTHEKYDRPAVEVIMTVLHAGGKFDNKSYQVSGGLHG
VGVSVVNALSAELTVEVRRDGALWRHRFEQGEPDEDGFERVRDLADDEGTGTTIRFLPDA
EIFETAEFSFDTLASRLRELAFLNSGVAITLSDERDGTSETFEYEGGIREFVEYLNETRT
PLHGDVIYFEDEEAAEDGVVQVEVAMQATDELQGSVHAFANNINTREGGTHLTGFKTALT
RVVNDYANDNGLIGDLDGNLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVE
SAVHERLGTFFEENPDVAETVVSKAAEAARARKAAKQAEELTRRKSALESTALPGKLADC
QSRDPEDSELFIVEGDSAGGSAKQGRNPEFQAILPLGGKILNVEKHRLDRVLQNDEIRNM
ITAVGTGIGDEFDISEARYQKIIMMTDADVDGAHIRTLLLTLFYRHMRPLVEAGYVYAAQ
PPLYRIRYRGNTYDAMTEAEREAIVEEKCDGNPDQVQRFKGLGEMNPEQLWETTMNPENR
VLKQITIDDAAAADRMFNVLMGDSVEPRKQFIKDHAPEAEWVDI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagggaatagtgagtacggagccgggcagatccaggtgctggagggcctc
caggccgtccgcaagcgcccggcgatgtacatcggttctacggacggtcgagggcttcac
catctggtgtacgaggtcgtcgacaactccatcgacgaggcgctcgcgggtcactgcgac
gagatcgaggtgaccgtccacgacgacggctcggtgtccgtctccgacgacggtcgcggc
atcccggtcgacacccacgagaagtacgaccggccggcggtggaggtgatcatgacggtc
ctccacgcgggcgggaagttcgacaacaagtcctatcaggtgtcgggcggcctccacggc
gtcggcgtctccgtggtgaacgccctctcggcggagttgaccgtcgaggtgaggcgcgac
ggcgcgctgtggcggcaccgcttcgagcagggcgagcccgacgaggacggcttcgaacgc
gtccgcgacctcgcggacgacgaggggaccggcacgacgatccggtttctgccggacgcg
gagatcttcgagacggcggagttctccttcgacacgctggcgagtcggctgcgcgagttg
gcgtttctcaactccggggtcgcgatcacgctgtcggacgagcgcgacgggacgagcgag
acgttcgagtacgagggcggcatccgcgagttcgtcgagtacctcaacgagacgcgcacg
ccgctgcacggcgacgtgatctacttcgaggacgaggaggcggccgaggacggcgtcgtc
caggtcgaggtggcgatgcaggcgaccgacgagcttcaggggtcggtccacgcgttcgcg
aacaacatcaacacgcgcgaggggggaacccacctcaccgggttcaagaccgcgctcacg
cgcgtcgtcaacgactacgccaacgacaacggcctcatcggggacctcgacggcaacctc
aagggcgaggacgtccgtgaggggctcaccgcggtcatctcggtgaagcaccccgacccg
cagttcgagggccagacgaagacgaagctcgggaacagcgaggtccgcgggatcgtcgag
tcggccgtccacgagcggctggggacgttcttcgaggagaacccggacgtggccgagacg
gtcgtgagcaaggccgcggaggccgcccgcgcccgcaaggccgcgaagcaggccgaggag
ctgacgcgccggaagtcggcgctggagtcgacggcgctgcccgggaagctcgcggactgc
cagtcgcgcgaccccgaggactccgagctgttcatcgtggagggcgactccgcgggcggc
tccgccaaacagggccgcaaccccgagttccaggcgatcctcccgctgggcgggaagatc
ctcaacgtcgagaagcaccgcctcgaccgggtgctccagaacgacgagatccggaacatg
atcaccgccgtcggcaccgggatcggcgacgagttcgatatcagcgaagcgagatatcaa
aaaattatcatgatgaccgacgccgacgtggacggagcccacatcaggacgctcctgctc
acgctgttctaccggcacatgcggccgctcgtcgaggcgggctacgtgtacgccgcccaa
ccgccgctgtaccgcatccggtatcgcgggaacacctacgacgcgatgaccgaggccgaa
cgcgaggcgatcgtcgaggagaagtgcgacggaaatcccgaccaagtccagcggttcaag
ggcctgggcgaaatgaatcccgagcagctgtgggagacgacgatgaacccggagaaccgg
gtgctcaagcagatcacgatcgacgacgccgccgcggccgaccggatgttcaacgtcctg
atgggcgactcggtcgagccgcgcaagcagttcatcaaggaccacgcccccgaggcggag
tgggtggacatctga
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