Halobaculum sp. CBA1158: Hbl1158_12025
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Entry
Hbl1158_12025 CDS
T08013
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_12025
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_12025
Prokaryotic type
Archaeal type
TFB
Hbl1158_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_LysW
A2L_zn_ribbon
Zn_ribbon_PaaD
Ribosomal_S27e
Zn_Ribbon_YjdM
Cyclin_C
Zn_ribbon_Elf1
Cyclin_N
Zn_ribbon_InsA
Sigma70_r4
DUF5816
Motif
Other DBs
NCBI-ProteinID:
UIO99253
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All DBs
Position
2291162..2292118
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AA seq
318 aa
AA seq
DB search
MEGPSRQRQRESDESETQSDETLTCPECSSDDVVMDADQGELVCDDCGLVLDERQIDRGP
EWRAFNHSERQSKSRVGAPVTETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQ
ERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVAT
AALYAACRQEGIPRSLDEVAEVSRVEQKEIGRTYRYISQELGLELKPVDPKQFVPRFASA
LGLSEETQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVT
EVTIRNRYQEQIEAMGFR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccgagccgacagcgacagcgggagagcgacgagtcggagacccagtcggac
gagacgctcacgtgcccggagtgttccagcgacgacgtcgtcatggacgccgaccagggg
gagttggtctgtgacgactgcgggctcgtgctggacgagcgccagatcgatcggggaccg
gagtggcgggcgttcaaccactccgagcgtcagtcgaagtcccgcgttggggccccagtc
accgagaccatgcacgacaagggtctcaccaccaccatcgactggaaggacaaggacgct
tacggtcggtcgctctcctcggagaagcgctcgcagatgcaccgcctccgcaagtggcag
gagcgcatccgcaccaaagacgccggcgagcgcaacctccagttcgccctctcggagatc
gaccgcatggcgagcgccctcggggttccgcggtcggtccgggaggtcgcctccgtgatt
tatcggcgtgcgctcaaagaggacctcatccgcgggcgctccatcgagggcgtcgcaacc
gcggcgctgtacgccgcctgccgccaggagggcatcccccggtcgctcgacgaggtcgcg
gaggtgtcgcgagtcgagcagaaggagatcggtcggacctaccgctacatctcccaggaa
ctcggcctggagttgaagcccgtcgaccccaagcagttcgttccccgcttcgcatccgcg
ctcggcctcagcgaggagacccaggccaaggcgacggagatcatcgacgtgtccgccgag
cagggactgctctcgggcaagtcacccacgggctttgcggccgccgccatctacgcggcc
tccctgctgtgcaacgagaagaagactcaacgcgaagtcgccgacgtcgcccaagtcacc
gaagtcaccatccgaaaccggtatcaagaacagatcgaagccatgggcttccgctga
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