Halobaculum sp. CBA1158: Hbl1158_13050
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Entry
Hbl1158_13050 CDS
T08013
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Hbl1158_13050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hacb03019
]
Hbl1158_13050
03009 Ribosome biogenesis [BR:
hacb03009
]
Hbl1158_13050
04131 Membrane trafficking [BR:
hacb04131
]
Hbl1158_13050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hacb04147
]
Hbl1158_13050
Messenger RNA biogenesis [BR:
hacb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Hbl1158_13050
Ribosome biogenesis [BR:
hacb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Hbl1158_13050
Membrane trafficking [BR:
hacb04131
]
SNARE
SNARE associated proteins
Others
Hbl1158_13050
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Hbl1158_13050
Exosome [BR:
hacb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hbl1158_13050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
TIP49
AAA_22
AAA_33
AAA_2
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_28
AAA_7
Mg_chelatase
AAA_lid_PRS2_C
ATPase
Sigma54_activat
AAA_18
NB-ARC
nSTAND_NTPase5
ABC_tran
AAA_17
AAA_3
TsaE
DUF815
Parvo_NS1
AAA_11
AAA_30
AAA_24
Zeta_toxin
ResIII
PhoH
NACHT
Vps4_C
IPT
Motif
Other DBs
NCBI-ProteinID:
UIO99440
LinkDB
All DBs
Position
complement(2504564..2506789)
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAKKAESLTLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVDTEPDGVCLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQQEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEILQIHTRGMPLSDDVDLDRLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRDDFHGALADVEPSAMREVLVELPKITWEDVGGLEDAQQQVKEAVEW
PLTTPEKFERMGIESPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTVIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGNV
MVIGATNRPDMIDPALIRSGRFDRLVMIGQPDEEGREQILKIHTDDTPLSADVSLRELAE
RTDGYVGSDLESIAREAAIQALREDGEAEDVNMRHFEQAMESVRPTISDEIMNYYADIEE
QFKGGGTDSLRTDRGGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtccaactcgaagtcgcgaaggcgtacccgaacgactccgggagagggatc
gcccgcctcgacccggacacgctgctacacctgaagctctcccccggcgacatcatcgag
atcgagggagccgagaccacagccgcgaaggtgtggcgcgccgaccggcaggactggaac
accgacaccgtccgcatcgacggcttcacccgccagaacgcggacgtggggatcggcgag
cgcgtcacgatccgcaaggccgaggcgaagaaggccgagtcgctgacgctggccccgccc
gaggaggcgtcggtgcagttcggctccgacgccgccggtatggtgaaacgacagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtgatgtcctccacgaaccacccgttc
atgcgctcgcccgggcaggcgatcccgctgatcgccgtcgacaccgaacccgacggcgtc
tgtctcatcaccgaggacaccgacgtggaactgcgcgaggagccgatctccgggttcgaa
aagaccggcggcggcatcacctacgaggacatcggcgggctccaacaggagatccagcgc
gtccgcgagatggtcgaactgccgatgaaacacccccagatattcaagaaactggggatc
gagccgccccagggcgtgctcctgcacggtccgcccggcacggggaagacgctgctcgcg
aaggcggtcgccaacgagaccagcgcgtcgttcttctcgatcgcggggccggagatcatc
tcgaagtactacggagagtccgaacagcagttacgagagatcttcgaggacgcgaaagac
gactccccgtcgatcatcttcatcgacgagttggactccatcgcgcccaagcgcgaggac
gtgaccggcgaggtcgagcgccgcgtcgtcgcccaactgctgacgatgatggacggactg
gagacgcgcgggcaggtgatcgtcatcggcgcgaccaaccgcgtcgactcggtcgacccc
gcgctccggcgtcccggccgcttcgaccgcgagatcgagatcggcgtccccgacgaggtc
ggccgcaaggagatcctccagatccacacccgcggtatgccgctgtcggacgacgtggac
ctggaccgcctcgccgacgagacgcacggcttcgtcggcgcggacatcgagagcctgacg
aaggaggcggcgatgaaggcgctcaggcgctacctgcctgagatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccggatgatcgtcaagcgcgacgacttccacggggcg
cttgcggatgtggagccgtccgcgatgcgggaggtgctcgtcgagctcccgaagatcacc
tgggaggacgtcgggggcctcgaggacgcccaacagcaggtgaaagaagccgtcgagtgg
cccctcaccaccccggagaagttcgaacggatgggcatcgaatcgcccaagggcgtgctg
ttgtacggcccgcccggcacggggaagacgctgatggcgaaggccgtcgccaacgagacg
aacgcgaacttcatctccgtgcgcggcccgcagctgctgtcgaagtgggtcggcgagtcc
gagaaggcgatccggcagacgttccggaaggcgcggcaggtcgccccgaccgtgatcttc
ttcgacgagctcgacagcctcgcacccagccgggggcaggagatggggaacaacgtctcc
gagcgcgtcgtcaaccaactgctcaccgagctcgacgggctggaggagatgggcaacgtg
atggttatcggcgcgacgaaccggccggacatgatcgacccggcgctcatccgctcgggc
cggttcgaccggctcgtgatgatcggccagcccgacgaggaggggcgcgagcagatcctc
aagatccacaccgacgacacgcccctaagcgccgacgtgagcctccgggaactcgccgag
cgcaccgacggctacgtcggctccgacctggagtcgatcgcccgcgaggcggccatccag
gcgctgcgcgaggacggcgaggccgaggacgtgaacatgcgccacttcgagcaggcgatg
gagtcggtccggccgaccatctccgacgagatcatgaactactacgccgacatcgaagag
cagttcaagggcggcggcaccgacagcctccgcaccgaccggggcggaagaatcggcttc
caatag
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