Halobaculum sp. CBA1158: Hbl1158_13980
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Entry
Hbl1158_13980 CDS
T08013
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hacb
Halobaculum sp. CBA1158
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hacb03016
]
Hbl1158_13980
Enzymes [BR:
hacb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Hbl1158_13980
Transfer RNA biogenesis [BR:
hacb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hbl1158_13980
Prokaryotic type
Hbl1158_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF4774
Motif
Other DBs
NCBI-ProteinID:
UIO99617
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All DBs
Position
complement(2676618..2677517)
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AA seq
299 aa
AA seq
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MATRRAYRVAYDGRPFFGFQRQPDVPTAEDALLDALAALDVVDRDAGGGGRDTPPGYAAA
GRTDRGVSAVRQTVAFDAPDWLTPRAFSSELPAGVRVWASADVHPEFHATHDAARRTYRY
HLHAPEADRDRARDAAAALSGEHDVHNLTSDPRGPNTRRDLSVSVASDDAAAGDRVGDRV
EGDADDRAGDEFLTLTVAAGGFPRECVRRIATVVRGVAVGDADLDRIAEVLGDEPVSGPR
GVAAAAPDPLVLADVSYPGVAFEPDPVAVATLREVFSERRVDALARVRVFDDVLAAASE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgtcgggcgtaccgcgtcgcctacgacggccggcccttcttcggcttccag
cgccagcccgacgtgccgaccgccgaggacgcgctcctggacgcgcttgcggctctggac
gtggtcgaccgcgacgcgggcggcggcggccgtgacaccccgcccggctacgccgccgcc
ggccgcaccgaccgcggcgtctccgcggtgcgccagacggtcgcgttcgacgcgcccgac
tggctcacgccacgcgccttctccagcgaactccccgcgggcgttcgggtgtgggccagc
gcggacgtacacccggagttccacgcgacccacgacgcggcccgccggacgtaccggtat
cacctccacgcgcccgaggccgaccgcgaccgcgcccgcgacgccgccgcggcgctgtcg
ggcgagcacgacgtgcacaacctcacgagcgacccgcgcgggccgaacacgcgccgcgat
ctgtcggtgtcggtcgcgtccgacgacgcggccgccggcgaccgcgtcggtgatcgggtc
gaaggcgacgctgatgaccgcgccggcgacgagttcctcacgctcacggtggccgccggc
ggcttcccccgcgagtgcgttcgccggatcgcgacggtcgtcaggggcgtcgccgtcggc
gacgccgacctcgaccggatcgccgaggtgctcggggacgaaccagtctcggggccccgc
ggcgtcgcggccgcggccccggacccgctcgtgctcgcggacgtctcctatccgggcgtc
gcgttcgagcccgaccccgtggcggttgcgacgctccgcgaggtgttctccgagcgtcgc
gtcgacgcgctggcccgcgtccgggtgttcgacgacgtgctcgccgcggcgtctgagtga
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