Halobaculum sp. CBA1158: Hbl1158_14850
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Entry
Hbl1158_14850 CDS
T08013
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03420
Nucleotide excision repair
hacb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbl1158_14850
03430 Mismatch repair
Hbl1158_14850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_14850
Enzymes [BR:
hacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hbl1158_14850
DNA repair and recombination proteins [BR:
hacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbl1158_14850
MMR (mismatch excision repair)
Other MMR factors
Hbl1158_14850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UIO99779
LinkDB
All DBs
Position
2863617..2866505
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AA seq
962 aa
AA seq
DB search
MSEPTPNEDQRHLIESTEGIYRVDAGAGTGKTFAVTRRYARILETTDATPEDVLLVTFTR
TAAREMRDRIGRRTTYDVRELQDAPISTFHAYCFRLLRRYGHTVPEALGIDEEIPDSVDL
LEDSVRERRLFSRFVSRFADDHPEHAELLRIFRDPATLHELVGELAAKGVVPTRAGWYRG
TDDPLTGDREAFFEAFAAANEPGEGARGPTNSDARSAVADWDASEYAPDAPPASAVHDGT
RVSREVVERAYDADRDALLTFVRDVYVEYLEYALSQNTLTQGLMLALAFVMLCDRPTVRD
RVAHEYVMVDEFQDTNELQFKIALLLSDTNNVCVVGDWKQSIYGFQHTSVENITEFDDRL
RRFASDLNADRTRINYPVDETETIPLYRNYRSSASILEFAEESLSIPATYGERVGDPLAD
ERSLVATNHVDNARIEAYRASAEHELLLDRIQAIVGNEAYAVEVREDPRPDEDAPAAERA
AAERERLGAPSYGDIAVFTRTRAFAREFLERAAEYGVPVAYEGGVELFDTPEAKLALAWL
RIAESDDRRGWAVALERAGYGVDRAETLLDAGAYPDAMTRFRDELAELETLGGFLRRVFD
RYGRTNAYADALVDHLTGLYENSTLPRGEAIQYVEANLAAGTTVEIDASPGEDAVTLRTV
HGAKGLEYPIVILANLNDRAFPHYGRPPACPVVYDDDLGVRQTREYSEAGAYPHVYRNWR
YSLLRSVRPSTYDEERRLLYVAMTRAKRHLLFTAGENPSRFMDGLSIDATEVDPEPERVD
SERPTAEPFAVDVPDRSSVPRRLSVHDLMDDGVYDDREGGRGTEFGTELHDFAEAYADGA
AAEPSNDDQRAVAAFLDGLDGDLRTEVPALLPLPGEPRVTLAGVIDLVHVTDGRVDVVDY
KTDPDRLAHGEYRTQLSAYHHVLASVYPDRTIRLVVYYTAEDEAVAVDPIDLDALRALVP
EK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccgacgccgaacgaggatcaacggcacctcatcgagtccacagaggggatc
taccgcgtcgacgcgggtgccggcaccggcaagacgttcgcggtcacccgccgctacgcc
cggatcctggagacgacggacgcgacccccgaggacgtcctgctggtcacgttcacgcgc
accgccgcccgggagatgcgcgaccggatcggccggcggacgacgtacgacgttcgggag
ctacaggacgcgccgatcagcacctttcacgcctactgtttccgcctgctccgccggtac
ggtcacaccgtccccgaggcgctgggcatcgacgaggagatccccgactccgtcgatctc
ctcgaggactccgtccgcgagcggcgactgttctcccggttcgtgtcgcggttcgccgac
gatcaccccgaacacgccgagctcctccggatcttccgcgaccccgcgacgctgcacgaa
ctcgtcggtgaactcgcggcgaaaggcgtcgtgccgacgcgagcggggtggtaccgcggg
accgacgatcccctgacgggcgaccgcgaggcgttcttcgaggcgttcgcggcggccaac
gagccgggggagggcgcgcgggggccgaccaacagcgacgcccggtcggcggtcgccgac
tgggacgcgagcgagtacgccccggacgcgccgcccgcctccgccgtacacgacgggacg
cgcgtgtctcgggaggtcgtcgaacgggcgtacgacgccgaccgcgacgccctccttacg
ttcgtccgagacgtgtacgtcgagtacctcgagtacgccctctcgcagaacaccctcacg
caggggctgatgctcgcgctggcgttcgtcatgctgtgcgaccggccgaccgtccgcgac
cgggtcgcccacgagtacgtgatggtcgacgagttccaggacacgaacgagctccagttc
aagatcgcgctcctgctgtcggacacgaacaacgtctgcgtcgtcggcgactggaagcag
tccatctacggcttccaacacaccagcgtcgagaacatcaccgagttcgacgaccggctc
cggcggttcgcgagcgacctgaacgccgaccggacccggatcaactacccggtcgacgag
accgagacgatcccgctgtaccggaactaccgatcgtcggcgtcgatcctcgagttcgcc
gaggagagcctctcgatccccgcgacctacggcgagcgcgtcggcgatccgctcgcggac
gagcggtcgctggtcgcgaccaaccacgtggacaacgcgcggatcgaggcgtaccgagcg
agcgcggaacacgagctgttgctcgatcggattcaagcgatcgtcggcaacgaggcgtac
gccgtcgaggtgcgcgaggacccccgccccgacgaggacgccccggcggccgagcgcgcg
gccgccgagcgcgagcgactcggcgcacccagctacggggacatcgcggtgttcacgcgg
acgcgggcgttcgcccgggagttcctcgagcgggccgccgagtacggggtaccggtcgcc
tacgagggcggcgtcgagctgttcgacacgccggaggcgaagctcgcgctcgcgtggctg
cggatcgccgagtccgacgaccgccgcgggtgggcggtcgccctcgaacgcgcgggctac
ggcgtcgatcgcgctgagacgctcctcgacgccggggcgtacccggacgcgatgacgcgg
tttcgcgacgagctcgcggagttggagacgctcggcggattcctccggcgcgtcttcgac
cgctacggccgcacgaacgcctacgccgacgcgctcgtcgatcacctcaccggcctctac
gagaacagcacgctcccgcgcggggaggcgatccagtacgtcgaggcgaacctcgcggcc
gggacgaccgtcgagatcgacgcgagtcccggggaggacgccgttacgctccggaccgtc
cacggcgcgaaggggctggagtacccgatcgtgatcctcgcgaacctcaacgaccgggcg
ttcccccactacggtcgcccgccggcgtgtccggtcgtctacgacgacgacctcggggtg
cgccagacccgcgagtacagcgaggcgggggcgtacccgcacgtctatcgcaactggcgg
tactcgctgttgcggtcggttcgcccgtcgacgtacgacgaggagcgccgcctgctgtac
gtcgcgatgacgcgcgcgaagcgacatctcctgttcacggccggcgagaacccgagtcgg
ttcatggacgggctgtcgatcgacgcgaccgaggtcgatccggagccggagcgggtcgac
tccgagcggccgacggccgagccgttcgcggtcgacgtccccgaccggtcgtcggttccg
cgtcgactcagcgtccacgacctcatggacgacggcgtctacgacgaccgcgagggcggc
cgcggcaccgagttcgggaccgaactccacgacttcgcggaggcgtacgccgacggcgcg
gcggcggagccgtcgaacgacgaccagcgcgcggtcgccgcgttcctcgacggtctcgac
ggggacctgcggaccgaggtcccggcgctgttgccgcttccgggcgaaccgcgggtcacg
ctcgcgggagtgatcgacctcgtgcacgtcaccgacggacgcgtcgacgtcgtcgactac
aagaccgaccccgatcgcctcgcacacggggagtaccgaacccagttgagcgcgtaccac
cacgtgctcgcgagcgtctacccggaccggacgatccgactcgtggtgtactacaccgcc
gaggacgaggcggtcgcggtcgatccgatcgacctcgacgcgcttcgagcgctcgtgccg
gaaaaataa
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