Halobaculum sp. CBA1158: Hbl1158_16220
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Entry
Hbl1158_16220 CDS
T08013
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_16220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_16220
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_16220
Prokaryotic type
Archaeal type
TFB
Hbl1158_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
PHF5
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UIP01686
LinkDB
All DBs
Position
pCBA1158-2:19297..20223
Genome browser
AA seq
308 aa
AA seq
DB search
MATRDIYETGFDEDVRTESSANQCPECDGRVTTNAVETICEDCGLVIDEQRIDHGPEWRG
FDEDERERTGAPLTAARHDRGLSTEIGRGTDAKGNEISGQKRRRLARMRREQTRGRWRSK
AERNLAHGLGEVRRLASALELSDSVRDQACQLFRSAQNEDLLRGRSIEAIAAASVYGACR
CNGLSRLVDDVSEMARVAESRVTNGYKTLNEELGLPAEPVSPSMFVPRLASDLECPDEIR
QRARTLAEQAEERGVTTGVHPAGFAAACLYKAGQEQGHWVTQSDVAETGNVTPTTIRTHH
ETLGELGV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctacgaaactggctttgacgaagacgtccgaacggaatcgagt
gcgaaccagtgtcccgagtgcgacggccgggtcaccaccaacgcagtcgaaaccatctgc
gaggactgtggcctggtcatcgacgagcagcgaatcgaccacgggccagagtggcgaggg
ttcgacgaagacgaacgggagcgcacgggcgctccgttgacggcggcccgccacgatcgc
ggcctgtcgacggaaatcggtcgcggcaccgacgcgaaggggaacgagatttccgggcag
aagcggcgtcgactcgcgcggatgcgtcgcgaacagactcggggtcgctggcggtcgaaa
gcggaacgaaatctcgcacacgggctgggcgaggtgcgtcggttggcgagtgcgctcgaa
ctctccgattcggtccgtgaccaggcgtgccagctcttccggagcgcccagaacgaggat
ctgcttcgtggcagatccatcgaggccatcgccgcggccagcgtctacggggcctgccgg
tgcaacggcctctcgcggttagtggacgacgtcagcgagatggcccgcgtcgcggagtca
cgagtcacgaacgggtacaagacgctgaacgaagagctgggcctccctgccgagcccgtc
tcccccagcatgttcgtgccgcgcctcgcttcggacctcgagtgtccggacgaaatccga
cagcgggcccgaactctggcggagcaggccgaggagcgcggcgtcacgacgggtgtccat
ccggctgggttcgcagcggcttgtctctacaaagcggggcaggaacaggggcactgggtg
actcaaagcgacgtcgcggagacaggaaacgtcacgccaacgaccatccggacgcatcac
gagacgctcggtgaactcggtgtctag
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