Halobaculum sp. CBA1158: Hbl1158_16715
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Entry
Hbl1158_16715 CDS
T08013
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_16715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_16715
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hbl1158_16715
Prokaryotic type
Archaeal type
TFB
Hbl1158_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
IBR_1
Zn_ribbon_3
zf_Rg
Zn_ribbon_LysW
IBR
Trm112p
Zn_ribbon_6
DZR_2
TackOD1
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
UIP01694
LinkDB
All DBs
Position
pCBA1158-2:106681..107643
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AA seq
320 aa
AA seq
DB search
MINKKQTYERSSDGHERDLVSVDDNTCPECQGQITQDGDQGEVTCESCGLVFEESRVDHG
PEWRAFTSDERDEKSRVGAPTTKLMHDKGLSTTIGWQDKDAYGQAVSGRKRAQLQRLRTW
DERFRTKDSRDRNLKQALGEISRMASALGLPEPVQETAGVLYRRAIEEDLLPGRSIEGMS
TASLYAATRQHGMPRTLTEFGDVSRVEKLRFQRAYRYLSRELGLKIEPENPTRYLPQFAS
SLDVSDEAERRSRELLEVATNNAVHSGKSPAGLAAAALYAASHLTNEQLTQETVSEVASV
SQVTIRNRYQELLEVYKEND
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgataaataaaaaacaaacctacgaacggtcgtcagatggccatgagcgggacttggtg
tctgttgatgataatacgtgtcccgagtgtcaaggccaaatcacccaggatggcgaccag
ggcgaagtaacgtgtgaaagctgtggattagttttcgaggaaagccgggtcgatcacggc
cccgaatggcgcgcgttcacgtcggacgaacgcgatgaaaagagtcgcgttggtgcaccg
acgacgaagttgatgcacgataaggggttgagtacgaccatcggctggcaggacaaggac
gcttacggacaggcggtttccggtcgtaaacgtgctcagttacagcgtcttcggacgtgg
gacgagcggttccgcacaaaagattctcgcgatcggaatctcaagcaagcgctcggtgag
atcagccgcatggcgtctgcactcgggctccccgaaccggtccaggaaaccgctggtgtc
ctctataggcgtgcaatagaggaggacttgctccccggccgctcaatcgagggtatgtcg
acagcttcgttgtatgcggctactcgacagcatggaatgcctcgaacattgactgaattt
ggagatgtaagtcgcgtcgaaaagctccgattccagcgggcatatcgatatctttcccgt
gaacttgggttgaagatcgaacctgaaaatcccactcggtatctcccacagtttgcgtca
tcgcttgacgtgagtgacgaagcagaacgacgctctcgggaactgctcgaggtggcaaca
aataacgccgtccacagtggcaaaagtccagcggggttggcagctgccgctctgtatgct
gcgagtcatctcacgaacgagcaactcacacaagagacggtgagtgaggttgctagtgtc
agtcaagtaacgatccgaaatcggtaccaagagcttctcgaggtgtacaaggagaatgac
tga
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