Halobaculum sp. CBA1158: Hbl1158_16835
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Entry
Hbl1158_16835 CDS
T08013
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hbl1158_16835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hacb03000
]
Hbl1158_16835
03021 Transcription machinery [BR:
hacb03021
]
Hbl1158_16835
Transcription factors [BR:
hacb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Hbl1158_16835
Transcription machinery [BR:
hacb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Hbl1158_16835
RNA polymerase III system
TFIIIB
Hbl1158_16835
RNA polymerase I system
SL1/TIF-1B
Hbl1158_16835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
UIP01619
LinkDB
All DBs
Position
pCBA1158-2:132995..133555
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AA seq
186 aa
AA seq
DB search
MSVTAESIQVENVVASSDIGQELDLETLSEDLGATDYDPDNFPGLVYRMHDPKAAALIFR
SGKVVCTGAKSVDDVTTALEYVFDELRELGVDVATSPDIEIQNIVSSGDLDHTLNLNAIA
IGLGLEHIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKQLDDAEQALTVIENRLT
DLGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcacagccgaatcaattcaagtcgagaatgtggtcgcgtcgtccgatatcggt
caagaactcgatctggaaacgctttctgaggatttaggagccaccgactacgatcctgat
aacttccctggactcgtgtatcggatgcatgatcctaaagccgcagcgctcattttccgc
tcggggaaagtcgtctgtacgggtgcaaaaagcgtcgacgatgtgacgactgcgttggaa
tacgtcttcgacgagctccgtgaattgggtgtcgatgtcgctacctctccagatatcgaa
atccagaatattgtctcaagtggggacctcgaccacacactcaatttgaatgcgattgcg
atcggcctaggtctcgaacacatcgaatacgaaccagagcagttcccggggctcgtctac
cggcttgacgacccggacgtcgtcgcactcctcttcgggagtggcaagctcgtcatcacg
ggcggaaaacagcttgacgatgctgaacaagcgcttacagtgatcgaaaaccggctcact
gacctcgggttactggagtaa
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