Helicobacter apodemus: CDV25_00395
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Entry
CDV25_00395 CDS
T05516
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
had
Helicobacter apodemus
Pathway
had03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDV25_00395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
had03021
]
CDV25_00395
03400 DNA repair and recombination proteins [BR:
had03400
]
CDV25_00395
Enzymes [BR:
had01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDV25_00395
Transcription machinery [BR:
had03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDV25_00395
DNA repair and recombination proteins [BR:
had03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDV25_00395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AWI33384
UniProt:
A0A099UJ22
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All DBs
Position
75901..76890
Genome browser
AA seq
329 aa
AA seq
DB search
MKSIKISPHVPTKIEVKEIGLNRVQISAYPFEFGYAITLAHPLRRLLLGSSVGSAPIALK
IAGVAHEFDSIRGVVEDVSHFIVNLKAIRFKTKDDQESITIDYKFTGPRVITGADLENDT
IDIVTPDTHLATINEDASLNFSIIIRKGIGYVASEDIRPDVPEGFMALDAYFTPVTNVTY
TTENILLEDDPNYEKVIFDIQTDGQVEPLTAFKNALSVMHRQMAIFNSELNIEVSEVSDG
EEDIPEIKTLLQSIDSLNFSARCFNCLDRSGIRYLGELVLLSEDQIKNIKNLGKKSLDEI
TMKLDELGYPVNKPISKDLALRLKKKFSN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtatcaaaatttctcctcatgtgccaacaaagattgaagttaaagaaattggt
ttaaatagagttcaaattagtgcatatccctttgaatttggatatgcaattactttagca
catccattgcgaagattattgcttggaagctctgttggtagtgccccaatagcacttaaa
atagcaggagtggcacatgagtttgattctattcgtggtgtagtggaagatgtttcacat
tttatcgttaatcttaaggcgattcgttttaaaactaaagatgatcaagaaagcattact
atagattataaattcactggaccaagagttattacaggtgcagatttggaaaatgatacc
attgatattgttactccagatacacatttagcaactattaatgaagatgcatcacttaat
ttttctatcattattcgtaagggaattggttatgtagctagtgaagatatacgaccagat
gttccagagggatttatggcattagacgcatattttacgcccgttacaaatgttacttat
actacagagaatattcttttagaagatgatcctaattatgaaaaggtaatttttgatatt
caaaccgatggacaagtagagcctttgactgcttttaaaaatgcgttaagtgttatgcat
agacaaatggcgatttttaattcagagcttaatatagaagtttcagaggttagtgatgga
gaagaggatattcctgagataaaaacactcttgcaaagtatcgatagtttgaattttagt
gcaagatgttttaattgtttagataggtcagggattcgttatttaggtgaattggtgtta
ttaagtgaagatcaaattaaaaatattaaaaatttaggtaaaaagtctttagatgaaatt
acaatgaaacttgatgaattaggctatccagtgaataaaccaatttctaaagatctagcc
ctacgtcttaagaaaaaattttctaactaa
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