Helicobacter apodemus: CDV25_00695
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Entry
CDV25_00695 CDS
T05516
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
had
Helicobacter apodemus
Brite
KEGG Orthology (KO) [BR:
had00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
had03016
]
CDV25_00695 (truA)
Enzymes [BR:
had01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CDV25_00695 (truA)
Transfer RNA biogenesis [BR:
had03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDV25_00695 (truA)
Prokaryotic type
CDV25_00695 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AGT
Motif
Other DBs
NCBI-ProteinID:
AWI33437
UniProt:
A0A2U8FC23
LinkDB
All DBs
Position
136625..137344
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AA seq
239 aa
AA seq
DB search
MFVAMKISYNGSMFFGFQSQSQKHTISNTLKKAFESVGIFSPFVGSGRTDKGVHATAQVI
SLDIPAFHSCLEELKNLLNTKLYPHIKIKQIWEVSKNFNARFSAKRRGYCYVLSKHYSPF
YSVFSYHHKIKNEALLQEAMAYLVGRHNFQAFSKKGGAGSKYCWREIYRVKLIQSRDFYI
LSFLGNSFLRSQIRLMVGFLLEIDKGKLTLGDLKRQLEGEEIFKIPAHPGGLFLSSVVY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagcaatgaaaatttcttataatggttctatgttctttgggtttcaaagccaa
agccaaaagcatactattagcaatacactcaaaaaagcctttgagagtgtaggcattttt
agtccttttgtagggagtggtaggacagataaaggagtgcatgcaactgctcaagtgatt
tctttagatatacctgcttttcatagttgcttagaggagttaaaaaatcttttaaacact
aaactttatccgcatattaaaattaagcaaatttgggaggtaagtaaaaatttcaatgct
cgttttagtgcaaaaagaagggggtattgctatgtattatctaagcattattctcccttt
tattctgttttttcgtatcatcataagataaaaaatgaggctttattgcaagaggctatg
gcttatttggttgggaggcataactttcaagctttcagcaaaaaagggggtgctggtagt
aagtattgttggcgtgaaatttatcgtgtaaaactcattcaaagcagggatttttatatt
ttatctttcttaggcaatagttttttacgctcacagattcgtttaatggtagggtttttg
ttagaaatagataagggaaaacttactttaggggatttaaagaggcaattagaaggggag
gagatttttaaaatccccgcacatcctgggggtttgtttttaagttctgttgtgtattag
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