Helicobacter apodemus: CDV25_01905
Help
Entry
CDV25_01905 CDS
T05516
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
had
Helicobacter apodemus
Brite
KEGG Orthology (KO) [BR:
had00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
had03016
]
CDV25_01905
Enzymes [BR:
had01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CDV25_01905
Transfer RNA biogenesis [BR:
had03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CDV25_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_15
TRM5-TYW2_MTfase
MTS
RrnaAD
Methyltransf_4
DREV
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AWI33651
UniProt:
A0A2U8FBN2
LinkDB
All DBs
Position
complement(398489..399598)
Genome browser
AA seq
369 aa
AA seq
DB search
MTCDYLGICGGCIEYPLEDKIALVAKSLAFDPYEVFLSSESSFRARCELGIYHKDNGFFY
TMRKGKQFVCIQNCPNLVLNIQQFLQVLHPILHQRDFREFINKLFALEILSTQQNELLIT
FIYHRRLEQSWLILATKLKKILEEKLLMKIALIGRSRGVKLVVDRDYVIEKLEVADKYYF
YRYDEGSFTQPNPSINVKMIEWILSKAEKDSLDLLEMYCGCGNFTLPLSQKFRKILATEI
SKTSIQAAKFAASKNKISNIEFVRLSGEECIEALTFQRKFRRLDSINLQEYTFSTILIDP
PRCGAGERVCRFLQQFNQIFYISCNPATLLKDLEILRQTHQITALAFFDQFPHTQHLESG
VLLKSKNNS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgattatttgggaatttgtgggggttgtatagaatatcctttagaggataaa
atagctttagtcgcaaaatctcttgcttttgatccctatgaagtttttttatcttcagag
agtagttttagagcacgttgtgaattaggaatctaccataaagataatgggtttttttat
actatgcgtaagggtaagcagtttgtttgcatacaaaattgcccaaatttggttttgaat
atccaacaatttttacaagtcttgcaccccattcttcaccaaagagattttagggagttt
attaataagctttttgctttagagatattatccacacaacaaaatgaactattaataact
tttatttaccataggagacttgagcaatcttggttaattttagcgacaaaattaaagaaa
atattagaagaaaagcttttgatgaaaatagcattaattggtcgctccagaggagttaaa
ctagttgtagatagggattatgttatagagaaattagaggttgccgataaatattatttt
tatcgttatgatgaagggagttttacacaaccaaatcctagtattaatgtaaaaatgatt
gaatggattttgtctaaggcagaaaaagattctttagatttattagaaatgtattgtggt
tgtgggaattttaccctccctttatcgcaaaaatttagaaaaatactggctactgaaatt
tctaaaacttcgattcaagcagcaaaatttgcagcttctaaaaataaaatttctaatata
gaatttgtgcgtttaagtggagaggagtgtatagaagcattgacctttcaaagaaaattt
aggcgattagattccattaatttgcaagaatatactttcagcactattttaatagaccca
cctcgctgtggagcaggggagagggtttgtcgatttttgcagcaattcaatcagatattt
tatatctcttgcaatcccgctacactcctaaaagatttagagattctaaggcaaacacac
caaattactgctttagccttttttgatcaattcccccatacgcaacatttagaaagtgga
gtgcttttaaaatctaaaaataattcataa
DBGET
integrated database retrieval system
