Helicobacter apodemus: CDV25_02000
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Entry
CDV25_02000 CDS
T05516
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
had
Helicobacter apodemus
Pathway
had03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDV25_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
had03400
]
CDV25_02000
Enzymes [BR:
had01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CDV25_02000
DNA repair and recombination proteins [BR:
had03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDV25_02000
Prokaryotic type
CDV25_02000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWI33669
LinkDB
All DBs
Position
415390..416085
Genome browser
AA seq
231 aa
AA seq
DB search
MEKLSISLDKIQMDSSWKEFLKEEFFKPYFLEIKQHFIQAKQKGAIIYPPAPLIFNAFNL
TPLPSLKVVILGQDPYHNKSQAMGLSFSVPKNIPLPPSLKNIYKELNEDLGIPPSSNGDL
SKWAKQGVLLLNSILSVEENKPASHQHFGWQLFTDDVIKKISQEKEGIIFLLWGNYARAK
SNLIDSKKHFILEAAHPSPLAKSGFLGCKHFSKTNKILQEQGKIPIDWQID
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttaagcatttctttagataaaatccagatggattcttcttggaaagaattc
cttaaagaagaattttttaagccctattttttagaaataaaacaacattttattcaagca
aaacaaaaaggggctatcatatatcctcccgccccactcatctttaacgcctttaatctc
acaccgctcccaagcttaaaagttgttattttaggacaagatccctatcataataaatcc
caagcaatgggactttctttttcagttcctaaaaatatccctctccccccctcacttaaa
aatatttataaggaattaaacgaagatttagggatacccccctctagtaatggtgattta
agtaaatgggcaaaacaaggtgtgctacttcttaatagtattttaagtgtagaggagaat
aaacctgcctctcatcaacattttggttggcagctctttacggatgatgttataaaaaaa
attagtcaagaaaaagaggggattatatttttattatggggaaattatgcaagggcaaag
agtaatcttattgatagcaaaaaacattttatattagaagccgctcacccatctccactt
gctaaaagcggttttttaggctgcaaacatttctcaaaaaccaacaaaatattacaagaa
caaggtaaaatccctattgattggcaaattgactaa
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