Helicobacter apodemus: CDV25_02045
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Entry
CDV25_02045 CDS
T05516
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
had
Helicobacter apodemus
Brite
KEGG Orthology (KO) [BR:
had00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
had03016
]
CDV25_02045
Enzymes [BR:
had01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDV25_02045
Transfer RNA biogenesis [BR:
had03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDV25_02045
Prokaryotic type
CDV25_02045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AWI33677
UniProt:
A0A2U8FCW0
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All DBs
Position
complement(421884..422708)
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AA seq
274 aa
AA seq
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MNCIFVAKKPLFISSNAYLSQLKKRDKVKKAGFSGILDPFACGTLIIAYGGYTRLFTFLD
KNPKVYQATLWLGLESDTLDIEGIKKIHNIKRFKEERLESLLQSFCGKVSFIPPKYSAKK
INGKKAYEIARSGGKVVLKAQEMEVFKIEFLNYSHPFLSFKVWVSEGSYIRSLGELIARE
LDCFGSLSYLERLSEGGLVYQNEKKLNPLDILPFPIIKCQENLKEAVFNGKRISKEDLKI
YKEGKYIVKFEEFFSIILYQEKNIEYLVNRISLC
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgaattgtatctttgttgctaaaaaacctctctttatttcttctaatgcttatttaagt
cagcttaaaaaacgcgataaggttaaaaaagctggatttagcgggattttagatcctttt
gcttgtgggactttaatcattgcttatgggggatatacaagactttttacatttttagat
aagaatcctaaagtttatcaagctacactttggctaggattagagagtgataccctagat
attgaagggattaaaaagattcataatattaagaggtttaaagaggagaggctagaatct
ttgttgcaaagtttttgtggtaaagtctcttttatcccgccaaaatatagtgcaaaaaaa
attaatggaaaaaaagcttatgaaattgctagatcaggggggaaggtggttttaaaagct
caagaaatggaagtttttaaaatagaatttttaaattactctcatccttttttaagtttt
aaagtttgggtgagtgagggcagctatatccgctctttaggagagttaattgctagagaa
cttgattgttttggctcacttagttatttagagcgattaagtgaggggggattagtctat
caaaatgaaaaaaaactaaatcctttagatattttgccttttcctattattaaatgtcaa
gagaatcttaaagaagctgtttttaatggaaaaagaatctctaaagaggatttaaaaatt
tacaaagaaggtaaatatatagtaaaatttgaggaatttttttctataattttataccaa
gaaaaaaatatagaatatttagtaaataggatttccttgtgttga
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