Helicobacter apodemus: CDV25_03290
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Entry
CDV25_03290 CDS
T05516
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
had
Helicobacter apodemus
Pathway
had03420
Nucleotide excision repair
had03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDV25_03290
03430 Mismatch repair
CDV25_03290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
had03400
]
CDV25_03290
Enzymes [BR:
had01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDV25_03290
DNA repair and recombination proteins [BR:
had03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDV25_03290
MMR (mismatch excision repair)
Other MMR factors
CDV25_03290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
CarD_TRCF_RID
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
AWI33893
UniProt:
A0A2U8FCK7
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All DBs
Position
674650..676740
Genome browser
AA seq
696 aa
AA seq
DB search
MQKKLLQQLNPSQQKAVKTIEGALLILAGAGSGKTKTITTRLAYLIDEIGIPPSDTLTLT
FTNKAAFEMQKRALDMIENTTPHPPLLCTFHKFGLLFLKFHIHHLERKNNFTLTDREDTK
KILKTFNNNLFPMPLLLSEISHYKNSKISPQEAIENAYSPTYKQIAKIYLDYQDFLLQNN
RVDFDDLLLLPLEILQKFPEIAKEISHKYQYIMVDEYQDTNELQYLLLKHLCFTHQNICV
VGDDDQSIYSWRGANIQNILNFTQHFSNAQMIKLEENYRSSKKILEAANNLISKNKERLG
KTLRSTLEEGKAVEILHSSDELEEVKNLCKIIKKLLANGVEAQNIAILFRLNALSRSLEE
GFNREKIPYTLVGTIRFYERSEIKDILSYFQVLTNIHDDFSLMRIINKPKRGIGKTTIDK
LKSLAEAKSCSIYQLYKEDVTLETLLGNKTLTNLKEFFNTLESLQKCLKDSPQDFLDIFE
SKIGFCESFNKSNEEVERVSNIQEFYGIYREYHKHNPLMELEDFLNELALRSDQEDVEMR
QQSKGIKGINCMSVHSSKGLEFDYVFIIGLEEGFFPMIKEYSNLEEERRLGYVAFTRAKK
ELYLSYVDSRFYKGNRANISPSRFLEECGVIYPKDSKYSLKSLENDSNFKKGDCIFHKIF
GAGRILEVTKSGKETKLRINFGGSIRNILSSYVKKV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaacttctacaacaactcaatccctcccaacaaaaagcggttaaaaccata
gaaggggcattgcttattctagccggagcaggaagtggaaaaacaaaaaccattacaaca
aggcttgcgtatttaattgatgaaattggaattccacctagtgatacccttacgctaact
ttcaccaataaagccgcttttgaaatgcaaaaaagggctttagatatgatagaaaatact
acccctcaccctccactgctttgcacctttcataaatttgggctattattcttaaagttt
catattcaccacttagagcgtaaaaataatttcacgctaactgatagagaagataccaaa
aaaatcctcaaaacattcaataataacctattccctatgcctttattacttagtgaaata
tcccactataaaaactccaaaattagcccacaagaagcgatagaaaatgcttatagcccg
acttataaacaaatcgcaaaaatctatttagactaccaagattttcttttacagaataat
agagttgattttgatgatttactacttttgccacttgaaattctccaaaaatttccagaa
attgctaaagaaattagccataaataccaatatattatggttgatgaataccaagataca
aatgaacttcaatatttacttttaaaacatctgtgctttacacaccaaaatatttgtgtt
gttggggatgatgaccaaagtatttatagctggcgtggtgcgaatatccaaaatatttta
aacttcacacagcattttagcaatgcccaaatgattaaactagaagaaaattatcgctct
agcaaaaaaatcttagaagctgctaataaccttatttctaaaaataaagaacgtttagga
aaaactcttagaagcacattagaggaaggaaaggctgttgagattctacacagtagtgat
gagttagaggaggtaaaaaatctctgtaaaatcattaaaaagcttttagctaatggagta
gaagcacaaaacattgccatactctttagacttaatgcactctctcgctctttagaagag
ggatttaatcgtgaaaaaatcccttataccttagttggtactatccgcttttatgaacgc
agtgaaatcaaagatattttaagttattttcaagttcttaccaatatccacgatgatttc
tctttaatgagaattattaataaacccaaaagaggtattggcaaaaccaccatagataaa
ctaaaatctcttgcagaagcgaaaagttgcagcatttatcagctatacaaagaggatgta
accctagaaacactcttagggaacaaaaccttaacaaacctaaaagagttttttaatact
ttagaatccttgcaaaaatgccttaaagattcccctcaagattttcttgatatttttgag
tctaaaatagggttttgtgaatcctttaataaaagcaatgaagaagttgaaagagtgagt
aatatccaagaattttatggaatttatagagaatatcacaaacataatccccttatggaa
ttagaagattttttaaatgagttagctttaagaagcgaccaagaagatgtagaaatgcgg
caacaatctaaaggaatcaaaggcataaattgtatgagcgtgcattctagtaaaggctta
gaatttgactatgtttttatcatcgggcttgaagagggattcttccctatgattaaagaa
tatagtaatttagaagaagagcgaagattaggctatgttgctttcacaagggcaaaaaaa
gagctttatttaagctatgtagattcaagattttacaaaggcaatcgtgccaatatttca
ccctctagatttttagaagaatgtggagttatttaccccaaagattctaaatattcctta
aaatctctagaaaatgatagtaactttaaaaaaggggattgtatcttccataaaattttt
ggtgcagggagaatcttggaagttaccaaaagcggcaaagaaacaaaattaagaataaac
tttgggggttctatacgcaatattttaagtagctatgtcaagaaagtataa
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