Helicobacter apodemus: CDV25_03735
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Entry
CDV25_03735 CDS
T05516
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
had
Helicobacter apodemus
Brite
KEGG Orthology (KO) [BR:
had00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
had03009
]
CDV25_03735 (rimO)
Enzymes [BR:
had01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CDV25_03735 (rimO)
Ribosome biogenesis [BR:
had03009
]
Prokaryotic type
ribosomal protein modification factors
CDV25_03735 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
RE_NgoFVII
VAPB_antitox
Motif
Other DBs
NCBI-ProteinID:
AWI33975
UniProt:
A0A2U8FEX0
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All DBs
Position
782880..784211
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AA seq
443 aa
AA seq
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MSKKLHLISLGCTKNLVDSEVMLGKLKDYENTQNLSEADLVIINTCGFIEAAKKESIGEI
LNALENKKENALLIASGCLSERYAKELKEEIPQIDIITGVGDYDKIDKLIQERKQSGKTI
VSNQKGTFLIQNNMRIISNSTIHAYIKLSEGCNQKCSFCAIPSFKGKLHSRTLDSTLKEV
KNLALKGFRDFTFISQDSSSYLRDFGIKDGLVDLIEGIENLVYEGIPIKSARILYLYPAT
TSAKLIQKIIQSPVFHNYFDMPLQHSSQKVLQQMGRNGGFKNLLKLMQKAPNSFIRTSFI
IGHPGEEEEDFKELCDFVESFHFDRINFFSFSCEEGTKSAMMEQIPQKIKNIRLKQIHTL
FQKQYQQSLKNLVGKEITAILEGISEESEYFYKARDIRFAPEIDGEILINDKTFEESLEF
GFYRIKITEIVGDTLIGCVIGKA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactgcatttaatttcgcttggttgcactaaaaatctcgttgatagtgag
gttatgctagggaaattaaaagattatgaaaatacccaaaatttaagcgaagcggattta
gttatcattaatacctgtggcttcattgaagcggctaaaaaagaaagtattggagagatt
ttaaacgctctagaaaacaaaaaagaaaatgcacttttaatcgcaagtggttgcttaagc
gaacgttatgctaaagagctaaaagaggagattccacaaattgatattattacaggcgtt
ggggattatgataagattgataaactcatacaagagagaaaacaaagtggaaaaactatt
gtttctaaccaaaaaggaacttttttaatacaaaacaatatgcgtattattagtaattct
acaatccacgcttatattaaactctctgaaggatgcaaccaaaaatgcagcttttgtgct
atcccctcctttaaaggaaagctgcattcaagaacacttgattcaacccttaaagaagtg
aaaaatctcgccttaaaaggttttagagactttacttttatctcccaagattcaagctca
tacctaagagattttggcattaaagatggattagtggatttaattgaagggattgaaaat
ctagtttatgaaggaatccctattaaaagtgcaaggattttatatctctaccccgcaaca
acttctgcaaaacttattcaaaaaatcattcaatcccctgtttttcataattattttgat
atgcccttgcaacatagctctcaaaaagttttacaacaaatggggcgcaatgggggattt
aaaaatcttttaaaattaatgcaaaaagctcccaatagttttatccgcacaagctttatc
atagggcatcccggagaggaagaagaagacttcaaagaactttgcgattttgtagaatct
tttcactttgataggataaatttctttagcttttcttgtgaagaagggacaaaaagtgcg
atgatggaacaaatcccacaaaaaattaaaaatataaggctaaaacaaatccatactctt
tttcaaaagcaataccaacaaagcctaaaaaatttagtaggcaaagaaattactgccata
ttagagggcattagtgaggaaagtgaatacttctataaagcaagggatatacgatttgct
ccagaaattgatggagagattttaattaatgataaaacctttgaagaatctttagaattt
ggattttatcgcataaaaataacagaaattgtaggggatactcttataggttgtgttatt
ggaaaagcctaa
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