Helicobacter apodemus: CDV25_04255
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Entry
CDV25_04255 CDS
T05516
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
had
Helicobacter apodemus
Brite
KEGG Orthology (KO) [BR:
had00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
CDV25_04255
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Ortholog
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GFIT
Motif
Pfam:
Beta-barrel_YknX
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
Beta-barrel_AprE
BSH_YknX
BSH_CusB
Beta-barrel_RND
HH_AprE
RND-MFP_C
LcnD_C
YknX_C
PTS_EIIA_1
BSH_LcnD
MalF_N_TM
DUF2247
Ubiquitin_6
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AWI34071
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Position
891527..892780
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AA seq
417 aa
AA seq
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MNTSENILQNLNPKRNYKKLLLLWIIALLILILLGGGIYYFSNRAPLIIYQTKEVFLGDI
SSTISANGTLSPTNEVSIGSVISGIVLKVFVDVNDRVSKGEVLAKIDSESIEQNLYRFQA
QLESAKAQLKSSQVALEEKKWQYQQLQNLYEKTQGKTPSMLELQSAKTSYNAALSDIEIK
KANIKEIETSIRSTQVDLKNSQIISPIDGIILKRSIEAGQSVAASFQAPEFFIVAESLEE
MELNASVSEADIGKVQVGQKVNFSVDSYPSKTFEEKINRVNYGSNSSTSSNGVVSYEVKI
YVHNKDLLLRPGMSATADIEVASAQNVLLVPSSALYFTPKITTKTQNKNPFNPLSNVKRR
KSPQKTAANQGKTLWILENNLPKQIEVEVGISNGEYTQISSELIQPGTQVIIGQQGS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcagaaaatattttgcaaaacttaaatcctaaaagaaactataaaaaactc
cttttattgtggattatagcccttttaatactcatcctcttaggtgggggaatctactat
tttagcaatagagcaccccttattatctaccaaaccaaagaagtattcctaggggatatt
tcaagcactattagtgctaatggaacactctctcctaccaatgaagtttctataggaagt
gttatttcaggtattgttttaaaggtttttgtagatgttaatgatagggtaagcaaagga
gaggttttagctaaaattgattcagagagtattgagcaaaatctctaccgatttcaagct
caactagaaagtgcaaaggctcaattaaaaagctctcaagtggctttagaagagaaaaaa
tggcaataccaacaactccaaaatctctatgaaaaaacgcaaggtaaaaccccttcaatg
ttagaattacaaagtgcaaaaacttcctataatgcagccctcagtgatatagaaattaaa
aaagccaatattaaagaaattgaaacctctatccgctctacccaagtggatttaaaaaac
tctcaaatcataagccccattgatggtattattttaaaacgttccattgaagctggacaa
agtgtagcggcttcttttcaagctcctgaatttttcatcgtagcagagagcttagaagaa
atggagcttaacgcaagtgtttcagaagcagatattgggaaagtgcaagtaggacaaaaa
gtgaattttagcgtagattcctacccctcaaaaacctttgaagaaaaaattaatcgtgtc
aattatggttctaattctagcacttcaagtaatggcgttgtaagctatgaagtaaaaatt
tatgtccataacaaagatttacttttgcgtccgggaatgagtgctacagccgatattgaa
gtagccagtgcacaaaatgttcttttagtcccctctagtgccttatatttcacccccaaa
atcaccaccaaaacacagaataaaaatcctttcaatcctttaagcaatgttaaaaggaga
aaatctccgcaaaaaacagcggctaatcaaggaaaaaccctttggatattagaaaataac
ttacccaaacaaatagaagttgaagttggtattagcaatggggaatacacacaaatctct
agcgaattaatccaaccaggcacacaagttatcataggacaacaaggtagctaa
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