Helicobacter apodemus: CDV25_05160
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Entry
CDV25_05160 CDS
T05516
Symbol
glcD
Name
(GenBank) glycolate oxidase subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
had
Helicobacter apodemus
Pathway
had00630
Glyoxylate and dicarboxylate metabolism
had01100
Metabolic pathways
had01110
Biosynthesis of secondary metabolites
had01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDV25_05160 (glcD)
Enzymes [BR:
had01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
CDV25_05160 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
KH_N4BP1_1st
Motif
Other DBs
NCBI-ProteinID:
AWI34218
UniProt:
A0A2U8FDW6
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Position
complement(1048423..1049802)
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AA seq
459 aa
AA seq
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MTQEQIRDLRAIVGEEDCFDDKAHLSAYCYDATRERKYPECVVFPHNEEEVSKVVKYCND
YKIPIVPRGAGSGFTGGALAVGGGVVLALEKYMNQILEIDMENMVARVQPGVVNMQLQKA
VEAVGLFYPPDPASEHYSTLGGNVSENAGGMRAAKYGITKDFVMALRAVLPNGNIIRAGK
KTIKDVAGYNIAGILIASEGTLGVITEITLKLLSKPKYSKSAMGVFPSIKSAMNAVYKTM
ASGVTPVAMEFLDNLTIKAVEEKFHKGLPKEAGAILITEVDANLEEEITHQITKIQEKFY
ENGANDFIVAKNEEESVNLWFARKNASPSISIYGSKKLNEDITVPRSKLPELLERIAEIS
KKYNVLIPCFGHTGDGNVHTNVMVDGTKEEEVKRGYEAIEEIFKITIELGGTLSGEHGIG
LSKAPFMKLAFTQEEMDLFRAIKKAFDPNNILNPGKMAL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagcagattagggatttaagggctattgttggagaggaagattgttttgat
gataaagctcacttaagtgcttattgttatgacgcaacaagagaaagaaaatatcctgaa
tgtgtcgtgtttcctcataatgaagaagaagtgagtaaagttgtaaaatactgcaatgat
tataaaatccctattgttccacgtggtgctggtagtggatttacaggaggggcattagca
gttggtggcggtgtagttttagccttagaaaagtatatgaatcaaattttagaaattgat
atggagaatatggtagcaagagtgcaacctggtgttgttaatatgcaacttcaaaaggca
gtagaggcagtaggattgttttatccacccgatcctgcaagtgagcattattctacctta
gggggtaatgtaagtgaaaatgcaggaggtatgcgagctgctaaatatggtattacaaaa
gattttgtaatggctttgcgggcagttttgcctaatggaaatattataagggcgggtaaa
aagactattaaagatgtggcgggttataatattgctgggattcttattgctagtgaagga
actttaggggttattacagaaattactttgaagcttttaagtaagccaaaatatagcaaa
agtgctatgggcgtcttcccaagtattaaatctgcaatgaatgcggtttataaaacaatg
gcaagtggtgttacgcctgtagctatggaatttttagataatcttaccattaaagctgtg
gaggagaaattccataagggcttaccaaaagaagcaggagcaatccttataacagaggta
gatgctaatttagaagaagaaattactcaccaaattacaaagatacaagaaaaattttat
gaaaatggagcaaatgattttattgtcgcgaagaatgaggaagaatctgtaaatttatgg
tttgctagaaagaatgcaagccctagtattagtatctatggaagtaagaaacttaatgag
gatattaccgttcctcgctctaaacttccggagcttttagagagaattgctgaaatttct
aaaaaatataatgtcctcattccgtgttttggtcatactggggatggtaatgtgcatact
aatgtgatggtggatggcacaaaagaagaagaagttaaaaggggttatgaagctattgaa
gagatttttaaaattaccattgaacttggtggcacattaagtggagagcacggcattggt
ctttcaaaggcaccttttatgaaacttgctttcacgcaagaagagatggatttattccga
gctattaaaaaagcttttgaccctaataatatattaaatcccggaaaaatggcattatga
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