Helicobacter apodemus: CDV25_05485
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Entry
CDV25_05485 CDS
T05516
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
had
Helicobacter apodemus
Brite
KEGG Orthology (KO) [BR:
had00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
had03032
]
CDV25_05485
03400 DNA repair and recombination proteins [BR:
had03400
]
CDV25_05485
Enzymes [BR:
had01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CDV25_05485
DNA replication proteins [BR:
had03032
]
Prokaryotic type
DNA Topoisomerases
CDV25_05485
DNA repair and recombination proteins [BR:
had03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDV25_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SPAM
Motif
Other DBs
NCBI-ProteinID:
AWI34274
UniProt:
A0A2U8FDN5
LinkDB
All DBs
Position
1120609..1123101
Genome browser
AA seq
830 aa
AA seq
DB search
MSDLLNQDIQNINIEDSIKESYLDYSMSVIVGRALPDARDGLKPVHRRILYAMYELGVTS
RVAYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQDFSMRLRLVDGQGNFGSIDGDSAAA
MRYTEARMTQASEEILRDIDKETVDFLPNYDDTLKEPDILPSRLPNILINGSNGIAVGMA
TNIPPHRIDEIVDALVYMIDNPKAELDEVLGFIEGPDFPTGGIIYGKNGIREAYESGRGR
IKIRAKTHIEKTKTKDVIVIDEIPYQVNKARLVEQIAELAKEKVIEGISEVRDESDREGI
RVVIELKREAMSEIVLNHLFKSTPMESTFGIILLAIYNKEPKIFTLLELLNLFISHRKSI
VIRRSIFELEKAKARAHILEGLRVALEHIDAIVALIRSSSDSKVAKEGLVSKFNLSEIQA
QAILEMRLQRLTGLERDKIENEYQELLKEIEYLSSILKSEELLNKIIKEELLEIKEKFST
KRLTAIEEDYESIDMEDLIPNESVVVTMSHRGYVKRVPVRTYEKQNRGGKGKISANTHDD
DFIESFFVSDTHDTIMFITNKGQLYWLKVYKIPEASRTAIGKAVVNLINLSPDEKIMATI
TTKDFNDDKSIAFFTKNGIIKRTNLSEFKNIRSVGVRAINLDDNDELVTAKIISSEIKEI
LVVTYEGMCVRFVVEDVREIGRAARGVTAIKFKMLKDYVIGATIIANENEEILSVSEKGI
GKRTEASEYRITKRGGKGVIAMKLTPKTGKLVGVVNVDENMDLMVLTSSGKMIRVDMQSI
RKAGRATSGVIIVNVNDEKVVSIARCPKEEKEIQESDEDIGLLGVNNKEE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttgctaaaccaagatattcaaaatataaatattgaagattctattaaagag
agttatcttgattattctatgagtgttattgtagggcgtgcattacctgatgctagagat
ggtttgaaacctgtccatagaagaatactttatgcaatgtatgaacttggggttacttct
agggttgcttataaaaagtctgcaaggattgtaggggatgtgataggtaaataccatcct
cacggagatactgcagtttatgatgcattagtaagaatggcacaagatttttctatgcgt
ctaagacttgtcgatggacaagggaactttggtagtattgatggggatagtgctgcggct
atgcgttataccgaagcaaggatgactcaagcttctgaagagattttgcgggatattgat
aaggagacggtggattttctccctaactatgatgataccctaaaagaaccggatatttta
cccagtcgtcttcctaatattttaattaatggttctaatggaatcgctgtaggaatggct
acaaatatccccccgcatagaatagatgaaattgtagatgctttagtttatatgattgat
aatcccaaagcagagcttgatgaggttttaggatttattgagggaccagattttccaaca
ggcggaattatctatggtaaaaatgggataagggaagcttatgaaagtggtagaggtaga
attaagattagggcaaaaacccatattgaaaaaaccaaaactaaagatgtgattgtgatt
gatgaaataccctatcaagtcaataaggcacgacttgtagaacaaattgctgaacttgca
aaagaaaaggttattgaaggcatttctgaagttagagatgaatctgatagagaggggata
agggttgttattgaattaaaaagagaggcgatgagtgagattgtgcttaatcatcttttt
aaatctacccctatggaaagcacttttgggatcatactcctagccatttataataaagag
cctaagatttttaccctcttagagcttttaaacttatttatctcccatcgtaaaagtatc
gttatccgccgcagtatttttgagctagaaaaggcaaaggctagagcacatattttagag
ggtttaagggttgccttagaacatattgacgctattgtagcacttatccgctctagtagt
gattctaaagtggctaaagagggattagtgagtaagtttaatttaagtgagattcaagcc
caagcgattttagaaatgcggttacaacgattaactggtttagagcgggataaaatagaa
aatgaataccaagaactccttaaagagattgaatacctaagctctattttgaaaagtgag
gaactcttaaacaaaattattaaagaagaattgctagagataaaagagaagttttcaacg
aagcgattaaccgctattgaagaagactatgaaagtattgatatggaggatttaatccct
aatgaatccgtagttgttactatgagccatagaggttatgttaagcgagtcccagttaga
acctatgagaagcaaaaccgtggcgggaaaggtaaaatctctgcaaatactcacgatgat
gattttattgaaagtttctttgtctctgatacacacgatacgattatgtttattaccaac
aaaggacaactctattggcttaaagtctataagattccagaagcaagccgaaccgctatt
ggtaaagctgtcgtaaatcttattaatctctctcctgatgaaaagattatggcaactatc
acaactaaagattttaatgatgataaatctattgccttttttaccaagaatggaatcatt
aaacgaacgaatttaagtgaatttaaaaatataagaagtgtcggggttagggctattaat
cttgatgataatgatgagttggttactgctaaaattatttcttcagagattaaagaaatc
ttagtggttacttatgagggaatgtgcgtgcgatttgttgtagaggatgttagggagatt
ggtcgtgcagcaagaggggttactgctattaaatttaaaatgttaaaagattatgtgatt
ggtgcaacgattattgctaatgagaatgaggagattttaagcgttagtgaaaagggtatt
ggcaaaagaacagaggctagcgaatatagaattaccaaaagaggcggtaaaggggtgatt
gctatgaagcttacccctaaaacaggaaaattagtaggcgttgtgaatgttgatgaaaat
atggatttaatggtgctaacaagcagcggtaagatgattagggtagatatgcaaagtatc
cgcaaagcaggtagggctacaagtggagtaattattgtaaatgtcaatgatgaaaaagta
gtgtctattgcacgatgccctaaagaagaaaaagaaatacaagagagtgatgaggatata
ggtttgctaggagtaaataacaaagaggaataa
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