Helicobacter apodemus: CDV25_06785
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Entry
CDV25_06785 CDS
T05516
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
had
Helicobacter apodemus
Pathway
had03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDV25_06785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
had03400
]
CDV25_06785
Enzymes [BR:
had01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDV25_06785
DNA repair and recombination proteins [BR:
had03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDV25_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PriA_C
ResIII
Zn_ribbon_PriA
PriA_3primeBD
nSTAND3
Zn_ribbon_6
PhoH
AAA_22
IstB_IS21
TrwB_AAD_bind
AAA_19
AAA_11
AAA_7
Cas3-like_C_2
SLFN-g3_helicase
RecA_N
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AWI34500
UniProt:
A0A2U8FE25
LinkDB
All DBs
Position
1377362..1379206
Genome browser
AA seq
614 aa
AA seq
DB search
MFYYLIALLKQKSPLLAYESITPLNIGEVVEVPLLKRSLRGVILKAIPKPNFECKPLKPL
KEYFSPSQFQLAEFIANYYCSSYASSFGVFIPFRQDFIQDFPFLSFEVKPLNENQSKALN
FINSNQSTLLFGDTGSGKTEIYIHLLNQTLQKGKNAIFLMPEIALTPQMEKRLKAIFGEY
IAFWHSKVSTKKKQGILQRLKEGELRILAGSRSSFFLPLSKLGLIIVDEEHDDAYKSASS
PRLNVRDTALFLAQQNHIKILLGSATPSLNTYYKALQKQNIFRLKGSFYNSQKEFIFCES
HDYFHPLIIENLTKNLESNKQAIVFLPTRANFKHLLCSHCGETIQCPYCSVSMSLHKKDS
SLKCHYCHYVSPLISTCPSCGYELKSLRIGTQEFAKELSTYLPNAKIACFDRDSITTQKQ
LTQTLESFNRHEIDILVGTQMLSKGHDYHKVALSVALGLDYLLKGSDYRAREKTLALMYQ
LAGRSGRKEDGKVIIQTLQKDFFQRYLQDYENFLQEELQMRQNLYPPFVRLALIKISHKN
KEKAHLLMQKALSTLPPHKKVEIVGYGDAPIEKIANKWRCVILLRSIESKALHSILRSLS
DFPCEIDIDPLDFT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
ttgttttattatctcattgcactgcttaaacaaaaatctccacttttagcttatgagagc
ataactcctttaaacattggtgaggtcgtagaagttcccttgcttaaaagaagccttagg
ggcgttatcctaaaagcaatcccaaagcctaactttgagtgcaaacccctaaaaccccta
aaagaatatttttcaccctcacaattccagcttgcagaatttatcgcaaattattattgt
agcagttatgcttcaagctttggggttttcataccctttagacaagacttcatacaagac
ttccccttccttagttttgaagtcaaacccctaaatgaaaaccaaagtaaagcactaaac
tttattaactccaaccaaagcacccttttatttggcgatacaggaagtggcaaaacagaa
atttatatccacttactcaaccaaaccctacaaaagggtaaaaacgctatttttcttatg
cccgaaattgctttaaccccacaaatggaaaaacgtcttaaagccatctttggcgaatac
atagccttttggcattctaaagttagcacgaaaaaaaagcaaggaattcttcaaaggctc
aaagagggcgaacttagaatcctagctggctctcgctcaagcttctttttaccccttagc
aagcttgggctaatcatcgtagatgaagaacacgatgacgcctataaatctgcctcctcc
ccgcgtttaaatgtgcgtgataccgccctattcctcgcacaacaaaaccatataaaaatc
cttttaggaagtgccaccccctcactaaatacctattacaaagccctacaaaagcaaaac
atcttccgcctcaaaggctctttttataactcccaaaaggaatttatcttttgtgaaagc
cacgattattttcacccccttattatagaaaatctcacaaaaaatctagaatccaacaaa
caagctatcgttttcttacctacaagggcgaacttcaagcatttgctttgtagccattgt
ggagaaacgatacaatgcccatattgcagtgtttctatgagtttgcacaaaaaagattct
agccttaaatgccattactgccattatgttagcccactcatatccacttgcccttcttgt
ggttacgaactaaaaagcctaaggattggcacacaagagtttgccaaagaactctctacc
tacttacccaatgctaaaatcgcttgttttgatagggattccattacgacccaaaaacaa
cttacccaaactctagaatcctttaatcggcacgaaattgatattttagtaggcacacaa
atgctctccaaagggcatgattaccataaggttgctttaagcgttgctttaggcttagac
tatctcctaaaggggagtgattatagggcaagagaaaaaaccctcgctttaatgtatcaa
ttagcagggagaagcggcaggaaagaagacggcaaagtcatcatccaaactttacaaaag
gacttttttcaacgatacttacaagattatgaaaactttctacaagaagagctacaaatg
cggcaaaatctctatcccccctttgtgcgtctagcccttattaaaatatcccataaaaac
aaagaaaaagcccatttgcttatgcaaaaagcactatccaccctccctccgcacaaaaaa
gtagaaattgtaggctatggtgatgcccccattgaaaagattgcgaacaaatggagatgc
gttatcttattgcgaagtatagaatctaaagccttgcatagtatcttaagaagcttaagc
gatttcccttgtgaaatagacattgaccccctagatttcacttaa
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