Helicobacter apodemus: CDV25_07320
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Entry
CDV25_07320 CDS
T05516
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
had
Helicobacter apodemus
Pathway
had03030
DNA replication
had03430
Mismatch repair
had03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDV25_07320
03430 Mismatch repair
CDV25_07320
03440 Homologous recombination
CDV25_07320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
had03032
]
CDV25_07320
03400 DNA repair and recombination proteins [BR:
had03400
]
CDV25_07320
Enzymes [BR:
had01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDV25_07320
DNA replication proteins [BR:
had03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDV25_07320
DNA repair and recombination proteins [BR:
had03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDV25_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF2555
Motif
Other DBs
NCBI-ProteinID:
AWI34592
UniProt:
A0A2U8FEE4
LinkDB
All DBs
Position
complement(1486704..1487705)
Genome browser
AA seq
333 aa
AA seq
DB search
MYQKELEVKLAKNTLIRAILLYGEDSFLIEYYGEKITQKLLEQGCEKNSFYFNDFDYESA
LSCLSQGSLFGDSSLVWIKIDKKIPKKQLDSLLATLQKTQSGHLILEFYQADNKTSAQYA
QDCKAMIQSFKGQDFFEVRFFKPNLKESLNILREYATKFELRISDFLLKKILEQQNFNLG
LTLAELKKYSIFDEEINTQIVNSLGYGLGSITYEEILELLLTKKPYYHHLEQFLEQGFEE
VSLISEIQRYFFTLFLFATHIKLYGNLSSEEVLGYKLPQALLEKKKNLAIRLNQSQYQNI
FYHLNKWREESIKGITKGNGFLKVLMKIEAILK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaaaagaacttgaagtaaaacttgctaaaaacacgcttataagagctatttta
ctttatggtgaagattcttttcttatagaatattatggagagaaaatcacacaaaagctt
ttagaacaaggttgtgaaaaaaatagtttttattttaatgattttgactatgaatctgcc
ctctcttgtctctctcaaggctctctttttggagattcctcacttgtatggattaaaata
gataaaaaaatccccaaaaaacagctagactcccttttagcaaccctacaaaaaacccaa
agtgggcatttaatcttagaattttatcaagcagacaacaaaacctccgcacaatatgca
caagactgcaaggcaatgattcaaagcttcaaagggcaggatttttttgaagtgcgtttt
ttcaaaccaaatttaaaagaaagcctcaatattttgcgggaatatgctacaaaatttgaa
cttagaatttcagattttcttttaaaaaagattttagagcaacaaaattttaatttaggt
ttaacccttgcagaattaaaaaaatatagcatttttgatgaagagattaatacacaaatt
gtgaattccttaggttatggattaggaagtattacatatgaagaaattttagaattatta
cttacaaaaaaaccctattatcaccatttagagcaatttttagagcaaggttttgaagaa
gtttcactcattagtgagatccaaagatatttttttaccctttttttatttgctacccat
attaagctctatgggaatctaagctctgaagaagtcttaggctataaactcccccaagcc
cttttagaaaagaaaaagaatctcgctatccgccttaatcaatcccaataccaaaacata
ttttatcatctcaataaatggcgtgaagaatccattaagggcataactaaaggcaatgga
tttttaaaggttttaatgaaaattgaagcaattttaaaatag
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