Helicobacter apodemus: CDV25_07480
Help
Entry
CDV25_07480 CDS
T05516
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
had
Helicobacter apodemus
Pathway
had00541
Biosynthesis of various nucleotide sugars
had01100
Metabolic pathways
had01250
Biosynthesis of nucleotide sugars
Module
had_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CDV25_07480 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
had01005
]
CDV25_07480 (rfaD)
Enzymes [BR:
had01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CDV25_07480 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
had01005
]
Core region
CDV25_07480 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Methyltransf_31
KR
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AWI34621
UniProt:
A0A2U8FEC8
LinkDB
All DBs
Position
complement(1523178..1524176)
Genome browser
AA seq
332 aa
AA seq
DB search
MQYISDTLEGKHILITGGAGFIGSNLALYFQEYHPKAKVVVFDCFRNEETFSNGNLKSLG
HFKNLLGFNGEVIVGDINNKQDLERLEENRFDYIFHQAAISDTTISNQETVLRSNVNAFK
DLLQLCLKTHSKMIYASSAGVYGNTPAPNNIGSGEIPQNIYGFSKLMMDNLASKYAQSFP
FLHIVGLRYFNVYGKNEFYKGKTASMILQLGLQALKSKKVRLFKMGEQKRDFVYIKDVIQ
ANIKAMRAKKSGVYNVGSGEARSYNDIVASLREHLGDFEVEYFDNPYNFFQTHTQANIAL
TKEFLGYESKFSLEDGIKDYVGQIQDIHLKGW
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatattagcgataccttagagggaaagcatattttaatcaccggaggagcagga
tttataggttctaatttagcattgtattttcaagaataccaccctaaggctaaagtagtc
gtctttgattgctttagaaatgaagaaacttttagtaatggtaatcttaaatctctaggg
cattttaagaatctcttaggttttaatggtgaagtaattgttggtgatattaacaataaa
caagatttagaacgattagaagaaaataggtttgattatatctttcaccaagcagctatt
tctgatactactattagcaatcaagagactgttttaagaagcaatgtcaatgcctttaaa
gatctattgcaattatgcttaaaaacacattctaagatgatttatgcctcaagtgctggt
gtatatggcaataccccagctcccaataatataggaagcggtgagattccccaaaacatt
tatggattttctaaacttatgatggataatttagcgagtaaatacgcacaaagctttcct
ttcttgcatatcgtaggattacggtattttaatgtctatggcaaaaatgaattttacaaa
ggcaaaaccgcttctatgattttacaattaggcttacaagccttaaaaagtaaaaaagtt
cggctctttaaaatgggggagcaaaaacgcgactttgtctatattaaagatgttattcaa
gctaatattaaagcaatgagggctaaaaaaagcggggtttataatgtaggaagtggagag
gctaggagttataatgatatagtagcctctcttagagagcatttaggggattttgaagtg
gaatattttgataatccctataatttttttcaaacccatacacaagctaatattgcactc
actaaagaatttctaggctatgagtctaaattctccttagaggatggcattaaagactat
gtagggcaaatccaagatattcatctaaagggctggtaa
DBGET
integrated database retrieval system
