Helicobacter apodemus: CDV25_07525
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Entry
CDV25_07525 CDS
T05516
Name
(GenBank) arginine--tRNA ligase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
had
Helicobacter apodemus
Pathway
had00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDV25_07525
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
had01007
]
CDV25_07525
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
had03016
]
CDV25_07525
03029 Mitochondrial biogenesis [BR:
had03029
]
CDV25_07525
Enzymes [BR:
had01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
CDV25_07525
Amino acid related enzymes [BR:
had01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CDV25_07525
Transfer RNA biogenesis [BR:
had03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CDV25_07525
Prokaryotic type
Other AARSs
CDV25_07525
Mitochondrial biogenesis [BR:
had03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CDV25_07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
tRNA-synt_1d
Arg_tRNA_synt_N
tRNA-synt_1
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
AWI34629
UniProt:
A0A2U8FEI4
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All DBs
Position
1531655..1533229
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AA seq
524 aa
AA seq
DB search
MYPSLKALISQTLDIECFLEKPKDRKFGHFALPTFSLAKTLKKNPPEIAQDFAKKLATLA
EIININVVGGYVNFSLSDGFLQECVKNFLTPKFLKNTKEKILLEYVSANPTGPLHIGHAR
GAIFGDCLARFGEYLGFEVVREYYINDAGTQIENLGRSIYIAGRHLFFNEAYNLPEDCYR
GEYILELAKEAKEHFGEECFESEKNIADLSVFGKDKMLEEIQANLAQIGIVFDNFVSEKT
LFKEWDNTLAQLQKGNGVYELEKKIWIKSSEYGDEKDRVIVRENGEPTYLAGDIIYHRNK
FKRSFDKYINIWGADHHGYIARIKAAIEFLGYESKNLEILLSQMVALLKNGEAYKMSKRA
GNFILLKDVVEEVGSDALRLAFLSKKADTHLEFDVEDLKKQDSSNPIYYINYAHARIHTL
FEKSHQDFQSFQGQSLEGITESLRDLLVLALNFSKVLEDSFSQRAPQKMVEYLRMLSSEF
HHFYNEEKILHTENEKQILSVLKIVAQALFQGLELLGVQAKTRM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaagccttaaagctcttattagccagactttagatattgaatgttttttagaa
aaaccaaaagataggaaatttgggcattttgctttaccaacttttagccttgctaaaact
ttgaagaagaatcctccagaaattgcacaagattttgctaaaaaattagcaactttagca
gagataataaacattaatgttgtgggtggatatgtgaatttttctttaagtgatggcttt
ttgcaagaatgtgtaaagaattttttaactccaaaatttttaaaaaatacaaaagaaaaa
attttgcttgaatatgtgagtgctaatccgacaggtcctttacatatcggacacgcaaga
ggagcaatttttggcgattgtttagcgcgttttggtgagtatttaggatttgaagttgtt
agggaatattatattaatgatgcgggcacacaaatagaaaatttaggacgttctatttat
attgccggaagacatttattttttaatgaagcttataacttaccagaggattgttataga
ggtgaatatattttagagttagcaaaagaagcaaaagagcattttggtgaagaatgcttt
gagtcggagaaaaatattgcggatttaagtgtttttggcaaagataaaatgttagaagag
atacaggctaatttagcacagattggaatagtatttgataattttgtaagcgaaaagaca
ctttttaaggaatgggataacacattagcacaattacaaaaaggtaatggagtttatgag
ctagagaaaaaaatatggataaaatctagtgaatatggggatgaaaaagatagggtgatt
gtccgagaaaatggggaacctacttatcttgctggagatattatctaccataggaataaa
tttaaacgctcttttgataaatacattaatatttggggggctgatcatcatggctatatt
gctagaataaaagcggctatagagtttttagggtatgagagtaaaaatttagaaatattg
ctctcacaaatggtagctttgctaaaaaatggtgaagcttataagatgagtaagcgagcg
ggtaattttattttattaaaagatgtggtagaggaggttggttctgatgctttgcgttta
gcttttttaagtaaaaaagccgatacacatttagaatttgatgtggaggatttgaaaaag
caagattcttctaatcctatctattatatcaattatgcacacgctaggattcatacactc
tttgaaaaatctcatcaagattttcaaagttttcaagggcagtctttagagggcattaca
gaatctttgcgtgatttattggttttagctttgaatttttctaaggttttagaagattct
tttagccaaagggctccccaaaagatggtggaatacttgcgtatgctctcttcagagttt
catcatttttataatgaagaaaaaattttacacacagaaaatgaaaagcaaattttaagt
gttttaaagattgtagcacaagctctttttcaaggattagaacttttgggtgtgcaagca
aagacaagaatgtaa
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