Helicobacter apodemus: CDV25_08030
Help
Entry
CDV25_08030 CDS
T05516
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
had
Helicobacter apodemus
Pathway
had00521
Streptomycin biosynthesis
had00523
Polyketide sugar unit biosynthesis
had00525
Acarbose and validamycin biosynthesis
had00541
Biosynthesis of various nucleotide sugars
had01100
Metabolic pathways
had01110
Biosynthesis of secondary metabolites
had01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CDV25_08030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDV25_08030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CDV25_08030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDV25_08030 (rfbB)
00525 Acarbose and validamycin biosynthesis
CDV25_08030 (rfbB)
Enzymes [BR:
had01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CDV25_08030 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
AWI34720
UniProt:
A0A2U8FEM8
LinkDB
All DBs
Position
1630302..1631318
Genome browser
AA seq
338 aa
AA seq
DB search
MRNVLITGGAGFIGSNFILYFLQKYPNYRLINVDLLTYAGDLENLQGVEHYENYAFIKGD
ICDKDFIENIFTHYAIDFVIHFAAQSHVDNSIKNPSAFIETNINGTFNLLHTAYLSWFDA
PNKPKKDKEHCIFHHISTDEVFGSLGESGYFSESTPYAPNSPYSASKASSDMLVRSYHHT
YGLKTFITNCSNNYGPKQHDEKLIPTIIRNALAGKGIPIYGDGQNIRDWLFVEDHCRAID
AVFHSCYFGESFNIGGNCERTNLEIATQICSILDSAAPKANGESYQNQITFVQDRAGHDR
RYAIDSIKIQKMLGWKPEENFETGLEKTLKWYFQKYKV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatgtcttaattacaggtggggcggggtttattgggagtaattttatcctttat
tttctgcaaaaatatccaaattatcgtttaatcaatgtagatttactcacttatgcgggg
gatttagagaatctacaaggtgtggaacattatgaaaattatgcttttataaagggtgat
atttgtgataaggattttattgaaaatatttttacacattatgcgattgatttcgttatt
cactttgcggcacaatcgcatgtagataattctataaaaaatcctagtgcgtttatagaa
acaaatatcaatgggacttttaatttgctccataccgcgtatttaagctggtttgacgct
cctaataaacccaaaaaagacaaagagcattgtatatttcatcacattagcaccgatgag
gtttttggctcattaggagagagtggctattttagtgaatctactccctatgcaccaaac
tcgccttattctgcttctaaggcaagtagtgatatgttagttaggagttatcatcacact
tatgggttaaagacttttatcacaaattgctctaataactatggacctaaacaacacgat
gagaagcttatccctacgattatccgcaatgctttagcgggtaaaggaattcccatctat
ggtgatgggcagaatatccgagattggctttttgtagaggatcattgcagggcgattgat
gcagtgtttcactcctgttactttggtgagagttttaatattggcgggaattgtgagcgc
accaatttagagattgctacacaaatttgctctattttagattctgctgcaccaaaagca
aatggagaaagttatcaaaaccaaatcactttcgtgcaagatagggcaggacacgatagg
aggtatgcaatagattctattaaaatacagaaaatgttaggttggaaacctgaagagaat
tttgaaactgggttagaaaaaaccttaaaatggtattttcaaaaatataaagtataa
DBGET
integrated database retrieval system