KEGG   Helicobacter apodemus: CDV25_08030
Entry
CDV25_08030       CDS       T05516                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
had  Helicobacter apodemus
Pathway
had00521  Streptomycin biosynthesis
had00523  Polyketide sugar unit biosynthesis
had00525  Acarbose and validamycin biosynthesis
had00541  Biosynthesis of various nucleotide sugars
had01100  Metabolic pathways
had01110  Biosynthesis of secondary metabolites
had01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:had00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CDV25_08030 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CDV25_08030 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CDV25_08030 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CDV25_08030 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CDV25_08030 (rfbB)
Enzymes [BR:had01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CDV25_08030 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 NAD_binding_4 RmlD_sub_bind adh_short
Other DBs
NCBI-ProteinID: AWI34720
UniProt: A0A2U8FEM8
LinkDB
Position
1630302..1631318
AA seq 338 aa
MRNVLITGGAGFIGSNFILYFLQKYPNYRLINVDLLTYAGDLENLQGVEHYENYAFIKGD
ICDKDFIENIFTHYAIDFVIHFAAQSHVDNSIKNPSAFIETNINGTFNLLHTAYLSWFDA
PNKPKKDKEHCIFHHISTDEVFGSLGESGYFSESTPYAPNSPYSASKASSDMLVRSYHHT
YGLKTFITNCSNNYGPKQHDEKLIPTIIRNALAGKGIPIYGDGQNIRDWLFVEDHCRAID
AVFHSCYFGESFNIGGNCERTNLEIATQICSILDSAAPKANGESYQNQITFVQDRAGHDR
RYAIDSIKIQKMLGWKPEENFETGLEKTLKWYFQKYKV
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgagaaatgtcttaattacaggtggggcggggtttattgggagtaattttatcctttat
tttctgcaaaaatatccaaattatcgtttaatcaatgtagatttactcacttatgcgggg
gatttagagaatctacaaggtgtggaacattatgaaaattatgcttttataaagggtgat
atttgtgataaggattttattgaaaatatttttacacattatgcgattgatttcgttatt
cactttgcggcacaatcgcatgtagataattctataaaaaatcctagtgcgtttatagaa
acaaatatcaatgggacttttaatttgctccataccgcgtatttaagctggtttgacgct
cctaataaacccaaaaaagacaaagagcattgtatatttcatcacattagcaccgatgag
gtttttggctcattaggagagagtggctattttagtgaatctactccctatgcaccaaac
tcgccttattctgcttctaaggcaagtagtgatatgttagttaggagttatcatcacact
tatgggttaaagacttttatcacaaattgctctaataactatggacctaaacaacacgat
gagaagcttatccctacgattatccgcaatgctttagcgggtaaaggaattcccatctat
ggtgatgggcagaatatccgagattggctttttgtagaggatcattgcagggcgattgat
gcagtgtttcactcctgttactttggtgagagttttaatattggcgggaattgtgagcgc
accaatttagagattgctacacaaatttgctctattttagattctgctgcaccaaaagca
aatggagaaagttatcaaaaccaaatcactttcgtgcaagatagggcaggacacgatagg
aggtatgcaatagattctattaaaatacagaaaatgttaggttggaaacctgaagagaat
tttgaaactgggttagaaaaaaccttaaaatggtattttcaaaaatataaagtataa

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