Helicobacter apodemus: CDV25_08255
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Entry
CDV25_08255 CDS
T05516
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
had
Helicobacter apodemus
Pathway
had00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDV25_08255
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
had01007
]
CDV25_08255
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
had03016
]
CDV25_08255
Enzymes [BR:
had01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CDV25_08255
Amino acid related enzymes [BR:
had01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CDV25_08255
Transfer RNA biogenesis [BR:
had03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CDV25_08255
Prokaryotic type
CDV25_08255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AWI34755
UniProt:
A0A2U8FGT6
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All DBs
Position
1671770..1674133
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AA seq
787 aa
AA seq
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MKFTRSIFKTILPLDNISSEVICATLDKIGLEVESFEKLVAPKKVIVGKILACKKHPDAQ
KLNVCEVAIGGEEGEYQSLQIVCGAKNAREGIFVAVALEEAVLPQMTIKRAILRGVESCG
MLCSSIEIGFPKINDGIIELDNSLGELIIGKELLEYDAFNDEVFEISITPNRGDCMSIIG
IARELSVGLNLEMQPLKMPKTSENSPGIGRVLQITTNEKYESSLMYKAIELHSIPTPCCV
ALFLAYNEALEEDWLSNVLGFATFYSGVILNAYPQDFCRLEDKDGIDKMLLKLKKDELGF
ESIYYKDRKLSTIGVESFSYKGFKHNKDKEFVVLEASYIPPQIIAQKVLEANIKVDTKIF
QRVSRGSNPDLKLGLDVFGSFLNDERIVFYTDTQELLKVIKRESITIDILLLSKVIGCVL
DKITIVNILKALEFKVELPADENLLIATPPLFRHDVIGFQDIAEEIIRFVGIDNVPSQPL
SFVQNNQINAESEFYHFQRKLSKKAIGVGFNEVVHFVFHNKEMLEKYGFETLEDKLELLN
PITQDLNTLRSTLLMGLIQAAVYNKNNGFSAISFAEIGFTYNKKRQENIKMAFLQSGLVC
QEHYPKTKGIKADFFAFADRISCVIGEFTLQAFQSNIKIFHPNQCAKIFRGKKEIGILAA
LHPALRESFGLEETYLCELDLKSLKDELPKVERYSKFQKVVRDLSILMPKEIPYYKLKET
IQQLKIPHILKFYPLDVYRDKSLEDQISLTIRFEIQSYEKTLEEKDIIEVMERVLAVLKT
KHKAELR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactagaagtatttttaaaaccattttgcctttagataatattagtagtgag
gtaatttgtgctactttagataaaattggattagaagttgaaagttttgagaaattagtt
gctcctaaaaaagtgattgtaggtaagattctagcttgtaaaaaacaccccgatgcacag
aagcttaatgtttgtgaagtagctattgggggtgaggagggggagtatcaaagccttcaa
attgtttgtggtgctaaaaacgctagagagggaatttttgtagctgtggcattagaagag
gcagttttacctcaaatgactattaaaagagcaattttaaggggtgttgagagctgtgga
atgctatgctctagcattgagataggttttcctaaaataaatgatggcattatagagtta
gacaatagtcttggggagttaattatcggtaaggaactcttagagtatgatgcttttaat
gatgaggtctttgaaatttctattactccaaatcgcggagattgtatgagtattatcggt
attgcaagagagttaagtgtaggattaaatttagaaatgcaacctttaaaaatgccaaaa
acttcggagaactctccaggaattggtagggtcttgcaaattacaacgaatgaaaaatac
gaatcttctttaatgtataaagctattgaattacactctattccaactccttgttgtgta
gctttgtttttggcttataatgaagccttagaagaggattggttgagtaatgtattgggg
tttgcgacattttatagtggggttattttaaacgcttatccgcaggatttttgtaggcta
gaagataaagatggaattgataaaatgcttttaaagttaaaaaaagatgaattaggcttt
gagagtatttattataaagatagaaaactatctaccattggtgtagaatctttttcttat
aaaggctttaagcacaataaagacaaagaatttgttgtcttagaggctagttatatccct
ccgcaaatcattgcacaaaaggttttagaagctaatatcaaggttgatactaaaatcttt
caaagagtttcaagagggagtaatccggatttaaaactcggacttgatgtttttggaagt
tttttaaatgatgagcgaatagttttttatactgatacacaagaactattaaaagttatt
aaaagagaatccattaccattgatattttattattatctaaagtaattggttgtgtgtta
gataaaattactattgtgaatattctaaaggcgttagaatttaaagtagaattacctgcg
gatgaaaatttgcttattgctacaccaccactttttaggcacgatgttatcgggtttcaa
gatattgcagaagaaatcatccgttttgtaggtattgataatgtgccaagtcagccttta
tcttttgtgcagaataatcaaattaatgcagaatcagagttttatcattttcaaagaaaa
ttaagtaaaaaagctattggtgttggttttaatgaagtggtgcattttgtttttcataat
aaagaaatgttagaaaaatatggttttgagactttagaggataaattagagctgttaaat
cccattacgcaagatcttaatactttacgctctaccttgcttatggggttaattcaagca
gcagtttataataaaaataatggatttagtgctatttcttttgcagaaattggttttact
tacaataaaaaacggcaagaaaatatcaaaatggcttttttgcaaagtggtcttgtttgc
caagagcattatcctaagaccaaaggtatcaaggcagacttttttgcttttgccgataga
atctcctgtgttattggagaatttaccttgcaagcctttcaaagtaatataaaaattttt
caccctaatcaatgtgcaaagatttttagaggcaaaaaggaaattggtattcttgcagct
ttgcatccagcactaagagagtcctttggattagaagaaacttatttatgtgagctagac
ttaaagtctctaaaagatgagttacctaaggttgagcggtattcaaagtttcaaaaagtt
gtacgtgatttaagtattcttatgcctaaagagattccttattataagcttaaagaaacc
atacagcaattaaaaattccgcatattttgaaattttatccccttgatgtttatagggat
aaaagtttagaggatcaaataagtttgacaatccgctttgagattcaatcctatgaaaaa
actttagaagaaaaagacatcatcgaagttatggagagggttttagcggtgcttaaaacg
aagcataaggcagaattacgatga
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