Helicobacter apodemus: CDV25_08370
Help
Entry
CDV25_08370 CDS
T05516
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
had
Helicobacter apodemus
Pathway
had00250
Alanine, aspartate and glutamate metabolism
had00310
Lysine degradation
had00350
Tyrosine metabolism
had00650
Butanoate metabolism
had00760
Nicotinate and nicotinamide metabolism
had01100
Metabolic pathways
had01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CDV25_08370 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CDV25_08370 (gabD)
00310 Lysine degradation
CDV25_08370 (gabD)
00350 Tyrosine metabolism
CDV25_08370 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CDV25_08370 (gabD)
Enzymes [BR:
had01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CDV25_08370 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CDV25_08370 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CDV25_08370 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
RepB-RCR_reg
Reb1_MybAD
DUF7230
Motif
Other DBs
NCBI-ProteinID:
AWI34773
UniProt:
A0A2U8FF46
LinkDB
All DBs
Position
complement(1699013..1700431)
Genome browser
AA seq
472 aa
AA seq
DB search
MDLFNHPHIFKDKQKDSFEVVNPANGEILAYIKNTHKQDLQNLIQKAKIAQKQWADMLAE
ERCDRLYTFYSLILQSKDFLAEIMTKEQGKPIAQAKAEITYAASFVKWFAAEARRVDGDI
LSPKIKGQKLLILKQPIGVCAAITPWNFPSSMITRKIAPALASGCAIIVKPASKTPLSAY
ALAILAKEAGILEDCFIVVNGDSTEISDVLCQSNDIRKLSFTGSTEVGKLLYQKCASSIK
KLSLELGGNAPFIVFNDANLEDAINGIMDSKFRNSGQTCVCANRIYIQSGIYDKICQALI
DKIPTLKVGDGLEDGVNQGPLIDKKALLKVKEHINDALQKGAKLLVGGSNHHLGGNFFQP
TLLKDVTQQMKVAKEETFGPLAPIFKFESEEEVIFNANDTEFGLAAYFFTQDYKRQWRVA
ESLEYGMVGINTGLISNEIAPFGGIKQSGLGREGSKYGIEEYLEIKYLCLNL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatttatttaatcatccccatatttttaaagataaacaaaaagatagctttgaagtt
gttaatcctgctaatggagagattttagcctatatcaaaaacacgcataaacaagattta
caaaaccttatccaaaaagccaaaatagcacaaaagcaatgggcggatatgttagcagaa
gaacgttgtgatagactttatacattttattcacttattctacaatcaaaggatttttta
gcagaaattatgacaaaagagcagggcaaacctatagcacaagcaaaagcagaaattact
tatgcagcctcttttgttaaatggtttgccgctgaagctagaagagttgatggggatatt
ttaagccctaaaataaaaggacaaaaactcctaatactcaaacaacctattggggtatgt
gcggctatcactccttggaattttccctcctcaatgatcactagaaaaattgcccctgcc
cttgctagtggttgtgctattattgtaaaacccgcctctaaaactccccttagtgcttat
gccttagcaattttagctaaagaggcaggaatcttagaggactgctttatagttgttaat
ggagattccacagaaattagtgatgtattatgccaaagcaatgacattagaaaactaagc
tttacaggttcaacagaagttggaaaactgctttatcaaaaatgtgcttctagcattaaa
aaactaagcttagaattaggaggtaatgcaccttttattgtttttaatgacgcaaattta
gaggacgccattaatgggattatggattctaaatttagaaatagcggacaaacttgtgta
tgtgctaatagaatctatatccaaagtggaatttatgacaaaatatgccaagccctcata
gataaaataccaaccctcaaagtcggagatggtttagaagatggagtaaatcaaggtccc
ttaattgataaaaaagctcttttaaaagttaaagaacatattaatgacgccctacaaaag
ggtgctaaacttttagttggtggaagcaaccatcatctaggaggaaatttttttcaaccc
actttattaaaagatgtaacccaacagatgaaagtcgccaaagaagaaacttttggacca
ttagcccctatttttaaatttgaaagcgaagaggaagtaatctttaatgctaatgatacg
gaatttggattagccgcttattttttcacacaagattataagcgtcaatggcgtgtcgca
gaatctttagaatatggtatggtagggattaatacaggattaatctctaatgaaatagcc
ccttttggggggataaaacaaagtggtcttggtagagaaggttcaaaatatgggatagaa
gaatatttagagataaaatatttgtgcttaaacctctaa
DBGET
integrated database retrieval system
