Helicobacter apodemus: CDV25_08730
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Entry
CDV25_08730 CDS
T05516
Name
(GenBank) cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
had
Helicobacter apodemus
Pathway
had00260
Glycine, serine and threonine metabolism
had00270
Cysteine and methionine metabolism
had00450
Selenocompound metabolism
had00670
One carbon pool by folate
had01100
Metabolic pathways
had01110
Biosynthesis of secondary metabolites
had01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDV25_08730
00270 Cysteine and methionine metabolism
CDV25_08730
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CDV25_08730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CDV25_08730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
had04147
]
CDV25_08730
Enzymes [BR:
had01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CDV25_08730
Exosome [BR:
had04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CDV25_08730
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
GDC-P
Motif
Other DBs
NCBI-ProteinID:
AWI34837
UniProt:
A0A2U8FGB8
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Position
complement(1766192..1767352)
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AA seq
386 aa
AA seq
DB search
MKFSTKAVFVAEEPNLSGKTSSDVISSIHLASTFAKPDFENTIKGFGYSRLTNPTREVVE
SKLAALENAKYAICYASGQAAECVSLLSFLKSDDEILCFDDIYGGTRRLLSKVFNHFNIK
VKYLDMTKLENIESNITSNTKMIWLESPTNPLLQLCDIKAICAIAKRHNILTVVDNTFAT
PYLQRPLDLGADVVLHSMTKYINGHSDSVGGAVVLNDDSLYEQLRFVSNSTGMILAPFDS
YLHARGLKTLALRMERHCSNALEIARFLESHNKIEKVIYPGLPSHPQHELAKEQMNGLFG
GVVSVYLKAEYQQVQVFAKNLKHFILAESLGGAESLFGSPYYMSHGSVDEEVKKALNITK
NLLRLSIGLEDVEDLKDALSNALDKI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttagcacaaaagccgtatttgttgctgaagagcctaatttaagtggtaaaacc
tcaagtgatgttataagctctatccatctagcaagcacctttgcaaaaccagattttgaa
aatactattaaggggtttggatattctagattaaccaatcctacgcgggaagttgtagag
agcaagttagcggctttagagaatgcaaaatatgcgatttgttatgcaagcggtcaggca
gctgaatgcgttagtttgttaagtttcttaaagtctgatgatgaaattctttgttttgat
gatatttatggggggacaaggcgacttttaagtaaagtgtttaatcattttaatattaaa
gtcaaataccttgatatgacaaaactagaaaatatagaatctaacatcacaagtaacact
aaaatgatttggttagaatccccaacaaatccgcttttgcagctttgtgatataaaagct
atttgtgcaatagctaagaggcataatatcttaactgtagtggataatacctttgctaca
ccttatttacaaagacccttagatttaggtgctgatgttgttctgcatagtatgacaaaa
tatattaatggacatagtgatagtgtagggggagcggttgttttaaacgatgattcttta
tatgaacaattgcgttttgtttctaattctacgggtatgattcttgctccttttgattct
tatttacacgctagggggttaaaaactttagcattaagaatggagaggcattgtagtaat
gctttagaaatcgcacgatttttagaatctcataataagatagaaaaggtgatttatcca
ggactcccctcacatccccaacacgaacttgcaaaagagcaaatgaatggtttatttggc
ggtgttgtgagtgtttatttaaaagcagaatatcaacaagtgcaagtttttgctaaaaac
cttaaacattttattttagcggagagtttaggaggggcagaaagtctctttggaagtcct
tattatatgagccacggaagtgttgatgaggaagttaaaaaggcattaaatattactaag
aatctactgcgattatctattggattagaagatgtagaggatttaaaagacgcattaagc
aatgccttagataaaatatag
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