Helicobacter apodemus: CDV25_08935
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Entry
CDV25_08935 CDS
T05516
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
had
Helicobacter apodemus
Pathway
had00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
had00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDV25_08935 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
had01007
]
CDV25_08935 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
had03016
]
CDV25_08935 (lysS)
Enzymes [BR:
had01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CDV25_08935 (lysS)
Amino acid related enzymes [BR:
had01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CDV25_08935 (lysS)
Transfer RNA biogenesis [BR:
had03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CDV25_08935 (lysS)
Prokaryotic type
Other AARSs
CDV25_08935 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TPR_IFT80_172
Motif
Other DBs
NCBI-ProteinID:
AWI34873
UniProt:
A0A2U8FFD6
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All DBs
Position
1811615..1813123
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AA seq
502 aa
AA seq
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MFRDDIYKAQRMQKAQQLRELGINPYGNGIAKEMTSNTFLQQFQYVQTMAEGEKKDTTQS
VQVAGRIKFIRLMGKAAFIKIEDMQGILQAYLSKNELDAMFETFKKNIEVGDIVALRGFP
FVTKTGELSLHTLELYFLAKAINPLPEKYHGLVDIELRYRQRYLDLIMNKEVRDSFVMRS
QIVSCVRHFFEEKGFLEVETPMMHPIPGGANAKPFVTYHNALNVERYLRIAPELYLKRLV
VGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYKDYKDLMVLIQELFNILLEILKLP
KVLNFNHHNINFQNFQTISYTNALIEIGGIPSDIVLDEEKLYAYLLKNNIPLETKMELGK
LQSEAFDAFVEHQLINPTFITEFPIAISPLARANDENPNIADRFELFIGGSEIANGFSEL
NDPLEQYKRFEAQVKAKEAGDEEAQYMDEDYINALCYGMPPTAGAGIGIDRLVMLLTNQP
NIKDVILFPALKPQKKEIQTKE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgtttagggatgatatttataaagcacaaaggatgcaaaaagcccaacaactaagagag
ttagggattaatccttatggtaatggcattgctaaagagatgactagcaatacttttttg
caacaatttcaatatgttcaaactatggctgagggagagaaaaaagatactactcaaagt
gtgcaagtagctgggaggattaaatttatccgcttaatgggtaaagcagcttttattaag
atagaagatatgcaaggaatcttacaggcgtatttatctaaaaatgagcttgatgcaatg
tttgagacttttaaaaagaatattgaagttggtgatattgtagctttaagagggtttccc
tttgtaactaaaacgggtgaattaagtttgcatactctagagctttattttcttgccaaa
gccattaatcctttgcctgaaaaatatcacggacttgtagatattgaattgcggtatcgt
caaagatatttagatttaattatgaataaagaggttagggatagctttgtaatgcgttcc
caaatagtatcttgtgtgcggcatttttttgaggaaaaaggttttttagaggtagaaaca
cctatgatgcacccaatacccggtggagctaatgcaaaaccttttgttacttatcataat
gctcttaatgtagaacgttatttgcgaatcgctccagaattatatttgaaacgattagtt
gttgggggatttgaagcagtttttgaaattaatcgtaattttaggaatgagggaatggat
cattcccataatcccgaatttactatgattgaattttattgggcgtataaggattataag
gatttgatggtattaatccaagaattgtttaatattttgcttgaaattttaaagctacca
aaagttttaaactttaatcatcataatattaattttcaaaacttccaaactattagttat
actaatgcccttattgaaattggtggaattcctagtgatatagttttagatgaagagaag
ttatatgcctatttattaaaaaataatattcctttagaaactaaaatggagttaggcaaa
ttacaaagtgaggcttttgatgcttttgttgagcatcagttgattaatcccacttttatt
acagagtttcctattgctattagccctttagcaagggctaatgatgaaaatcctaatatt
gctgatagatttgaattatttattggagggagcgaaattgctaatggatttagtgagcta
aacgatcccctagaacaatataaacgttttgaagcacaggttaaggctaaagaagcaggt
gatgaggaggcacaatatatggatgaagattatattaatgccctctgctatggtatgcca
ccaactgctggagcagggatagggattgataggcttgtgatgttattaactaatcagcca
aatattaaagatgtgattttattcccagctctcaaacctcaaaaaaaagaaattcaaaca
aaggagtaa
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