Helicobacter apodemus: CDV25_08940
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Entry
CDV25_08940 CDS
T05516
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
had
Helicobacter apodemus
Pathway
had00260
Glycine, serine and threonine metabolism
had00460
Cyanoamino acid metabolism
had00630
Glyoxylate and dicarboxylate metabolism
had00670
One carbon pool by folate
had00680
Methane metabolism
had01100
Metabolic pathways
had01110
Biosynthesis of secondary metabolites
had01120
Microbial metabolism in diverse environments
had01200
Carbon metabolism
had01230
Biosynthesis of amino acids
had01240
Biosynthesis of cofactors
had04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDV25_08940 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CDV25_08940 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDV25_08940 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CDV25_08940 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CDV25_08940 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CDV25_08940 (glyA)
Enzymes [BR:
had01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CDV25_08940 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AWI34874
UniProt:
A0A2U8FFD8
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Position
1813126..1814376
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AA seq
416 aa
AA seq
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MSYFLEENDFEVFNYIQQELDRQNTHLEMIASENFTFPSVMEAMGSILTNKYAEGYPYKR
YYGGCEFVDKIEELAINRAKKLFGCEFANVQPHSGSQANGAVYSALLKPYDKILGMDLSH
GGHLTHGAKVSITGQMYQSFSYGVELDGWINYDKVEEIAKVVKPNILVCGFSAYSRVLDF
KRLSEIAKNVGVILMADIAHVAGLVVAGEYPNPFPYADIVTTTTHKTLRGPRGGLILTNN
EEYAKKIDKAVFPGMQGGPLMHVIAGKAVGFMENLKPTWKEYAKAVKLNAKTLAEVLMQR
GYKVVSDGTDNHLVLLSLLDKEFSGKDADLALGNAGITVNKNAVPGEIRSPFVTSGVRIG
SPALSARGFKEKEFVIVANKIADVLDDIKNTQKQALIKSELKELAIKFPIYTKAIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagctattttttagaagagaatgattttgaagtttttaattatatacaacaagaatta
gatcgacaaaatacccacttagagatgattgcaagtgaaaactttacttttcctagtgtt
atggaggctatgggtagcatacttactaataaatacgcagagggttatccctataaacgt
tattatggaggttgtgagtttgttgataagatagaggaattagcgattaatcgggctaaa
aagctttttggttgtgaatttgctaatgtccaaccgcattctggttcccaagctaatggt
gctgtgtattctgcactcttaaaaccttatgataagattttagggatggatttaagccac
ggtgggcatttaacccatggtgcaaaagtaagtattactgggcagatgtatcaaagtttc
tcttatggtgtagagcttgatggttggattaattatgataaagtagaagaaattgcaaaa
gtcgtgaagccaaatattcttgtttgcggctttagtgcttattcaagggttttagatttt
aaacgattaagtgaaattgcaaaaaatgttggtgtgattttaatggctgatattgctcat
gtcgctggattggttgtagcaggagaatatcctaatccattcccttatgcagatattgtt
actaccacaacacataagactttaagaggacctagaggtggattaatacttaccaataat
gaggaatatgctaaaaaaattgataaagcggtgtttccaggaatgcaaggtggtccttta
atgcatgttattgcagggaaagcggttggttttatggaaaatttaaaacctacttggaag
gagtatgctaaagcagtcaaacttaatgcaaaaactttagcagaagttttaatgcaaaga
ggttataaggtcgttagcgatggcactgataatcatttagttttattatctttattggat
aaagagtttagcggtaaagatgcggatttagctttgggaaatgctggaattacggttaat
aaaaatgctgttcctggagagatacgaagtccttttgttactagtggtgttaggattgga
agtcctgctttaagtgctaggggctttaaggaaaaggaatttgtaattgtagcaaataaa
attgccgatgtcttagatgatattaaaaatacgcaaaaacaagcattaataaaaagtgaa
ttaaaggaacttgcgataaaatttccaatttacactaaggcaattttctaa
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