KEGG   Hypericibacter adhaerens: FRZ61_14690
Entry
FRZ61_14690       CDS       T06413                                 
Symbol
rtcB
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
hadh  Hypericibacter adhaerens
Brite
KEGG Orthology (KO) [BR:hadh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hadh03016]
    FRZ61_14690 (rtcB)
Enzymes [BR:hadh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     FRZ61_14690 (rtcB)
Transfer RNA biogenesis [BR:hadh03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    FRZ61_14690 (rtcB)
 Prokaryotic type
   tRNA splicing ligases
    FRZ61_14690 (rtcB)
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QEX21540
UniProt: A0A5J6MZ30
LinkDB
Position
complement(1653163..1654350)
AA seq 395 aa
MITERGRQGGQIRMWTEGVPVEPHAREQIHNIAGLPFIYRHVAVMPDVHLGKGATVGTVL
PTQGAIVPAAVGVDIGCGMAAVRTNIEAGRLPDELKAIRLRMEELIPVGAASHRTVPRHA
ERRWYGKLKTRFERIQEKHPALQVKSSPAEQIGTLGAGNHFEELCLDEEGMLWIMLHSGS
RNIGNRIGTHFIALAKREMEKQSIHLPDRDLAFLTEHTALFNDYVEAVGWAQDYARANRD
AMLEAIARLLQEFFPDLELTAEAVNCHHNYVEKETHFGASIWVTRKGAVRAREGDLGIIP
GSMGARSFIVRGKGNPESFCSCSHGAGRVMSRTEAKRSFTLEDHRLATDGVECRKDEGVI
DETPRAYKDIDAVMAAQADLIEVVHTLKQVLCVKG
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgatcaccgaacgcggccggcagggcgggcagatcaggatgtggaccgaaggcgtcccc
gtcgagccccacgcgcgcgagcagattcacaacatcgcgggcctgcccttcatctaccgg
catgtcgcggtgatgcccgacgtccatctcggcaagggcgccaccgtcggcaccgtgctg
ccgacgcaaggcgccatcgtcccggccgccgtcggcgtcgatatcggctgcggcatggcc
gcggtgcgcaccaacatcgaggccggccggctgcccgacgagctgaaggcgatccgcttg
cggatggaggagctgatcccggtcggcgccgcctcgcatcgcaccgtcccgcgccatgcg
gagcggcgctggtacggcaagctcaagacgcgcttcgagcggatccaggagaagcacccg
gccctccaggtgaagagctcgcccgcggagcagatcggcacgctcggcgccggcaatcac
ttcgaggagctgtgcctcgacgaggaaggcatgctctggatcatgctgcattcgggctcg
cgcaacatcgggaaccggatcggcacgcatttcatcgcgctcgccaagcgggagatggag
aagcagagcatccatctgcccgaccgggacctggcgttcctcaccgagcataccgccctc
ttcaacgattatgtcgaggcggtgggctgggcccaggactatgcccgcgccaatcgcgac
gccatgctcgaggcgatcgcccggctgctgcaggaattcttcccggacctcgagctgacg
gcggaggcggtgaactgccaccataactatgtcgagaaggagacgcatttcggcgccagc
atctgggtcacccgcaagggggccgtgcgggcgcgcgagggcgatctcggcatcatcccg
ggctcgatgggcgcgcgcagcttcatcgtgcgcggcaagggcaatcccgagagcttctgc
tcctgttcgcacggggccggccgcgtcatgtcccggaccgaggccaagcggagcttcacg
ctggaggatcatcggctggcgacggacggcgtcgaatgccgcaaggacgagggcgtgatc
gacgagacgccccgggcctacaaggatatcgacgccgtcatggcggcccaggccgacctg
atcgaggtggtccatactctgaagcaggtgctctgcgtgaaggggtga

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