Hypericibacter adhaerens: FRZ61_29020
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Entry
FRZ61_29020 CDS
T06413
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hadh
Hypericibacter adhaerens
Pathway
hadh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hadh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ61_29020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hadh03019
]
FRZ61_29020
Enzymes [BR:
hadh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FRZ61_29020
Messenger RNA biogenesis [BR:
hadh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRZ61_29020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QEX22968
UniProt:
A0A5J6MYZ2
LinkDB
All DBs
Position
complement(3296840..3298366)
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AA seq
508 aa
AA seq
DB search
MTDFASLGLAEPLLRAVAQEGYTVPTPIQARTIPYVMQGRDLLGIAQTGTGKTAAFALPI
LHRLAQNRKAPQPKGCRVLVLAPTRELAAQIAESFETYGRHFRFSVAVVVGGVKPGPQIR
ALARGVDVLVATPGRLNDHLGTGAARVDGAEILVLDEADHMLDLGFLEPIKKILRRLPKE
RQTLFFSATMPSAIGALAKDMLRDPASVEVTPVATTAEKVSQQVYLVEKPAKAALLVDLL
SKPEFGRTLVFTRTKRGADRVAERLESAGLPAAAIHGNKSQGQRERALDSFRSGRTAILV
ATDIAARGIDVDGITHVVNFDLPEVPEAYVHRIGRTARAGAAGVAISFCDHEERAYLRDI
ERTTRQSIPQVDRRGAVAATPQPAARDKTQKPHRGHERSRDDRRHQNGGGTASGHRDQGE
SRRQGHDGQPRHAGRGNQEGRNPHDGRGHQEARGHQEGRGHHEGRGHPHEGRGHQQEGRG
SRSGRPGGRRRGSRPSYQPNPGRFAAGD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatttcgcttcgctcggcctggccgagcccctcctgcgcgccgttgcccaggaa
ggctataccgtgccgaccccgatccaggcgcgcaccattccctatgtcatgcaaggccgc
gacctgctcggcatcgcccagacgggtaccggcaagacggcggccttcgccctcccgatc
ctccatcgcctggcccagaaccggaaggcgccgcagcccaagggttgtcgtgtcctggtg
ctggcgccgacccgtgagcttgcggcccagatcgccgagagcttcgagacctatggccgc
catttccgcttctcggttgcggtcgtcgtgggcggggtgaagcccggcccgcagatccgc
gcgctcgcgcgcggcgtcgacgtgctcgtggccacgcccggccgcctcaacgatcatctc
ggcaccggcgccgcgcgcgtcgacggcgccgaaatcctggtgctggacgaggccgaccat
atgctcgacctcggtttcctcgagccgatcaagaagatcctgcgccgcctgcccaaggag
cgacagaccctgttcttctcggcgacgatgccctcggccatcggcgcgctcgccaaggac
atgctgcgcgatcccgccagcgtcgaggtgacgccggtggcgaccaccgccgagaaggtg
agccagcaggtctatctggtcgagaagcccgccaaggcggcgctcctggtcgacctgctg
tcgaagcccgagttcggccgcacgctggtcttcacccgcaccaagcgcggggccgaccgc
gtggccgagcggctggaatcggccggcctgccggccgcggccatccacggcaacaagagc
cagggccagcgcgagcgggcgctcgacagcttccgttccggccgcacggcgatcctggtg
gcgaccgacatcgcggcccgcggcatcgacgtcgacggcatcacccatgtggtgaatttc
gacctgccggaagtgccggaagcctatgtgcaccgcatcggccgcacggcgcgcgccggt
gccgccggcgtcgcgatctccttctgcgatcatgaggagcgggcctatctgcgcgatatc
gagcgcaccacgcgccagtcgatcccgcaggtggatcgccgcggcgccgtcgcggccacg
ccgcagccggcggcgcgggacaagacccagaagccgcaccgcggccatgagcggagccgg
gacgaccgccgtcaccagaacggcggtggcacggcctcaggccatcgcgaccagggcgag
agccgccgccagggccatgacgggcagccccgccatgccgggcgcgggaatcaggaaggc
cgcaacccgcatgacgggcgcggtcatcaggaagcgcgcggtcaccaagaggggcgcggc
catcacgagggccggggacatccgcatgagggacgcggtcatcagcaggaggggcgcgga
tcgcgctccggccggccgggtggccgccgtcgtgggtcgcggcccagctatcagcccaat
cccggtcgcttcgccgccggcgactga
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