Hypericibacter adhaerens: FRZ61_36870
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Entry
FRZ61_36870 CDS
T06413
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
hadh
Hypericibacter adhaerens
Pathway
hadh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hadh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ61_36870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hadh03019
]
FRZ61_36870
03009 Ribosome biogenesis [BR:
hadh03009
]
FRZ61_36870
Enzymes [BR:
hadh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FRZ61_36870
Messenger RNA biogenesis [BR:
hadh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRZ61_36870
Ribosome biogenesis [BR:
hadh03009
]
Prokaryotic type
rRNA processing factors
FRZ61_36870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF3095
Motif
Other DBs
NCBI-ProteinID:
QEX23748
UniProt:
A0A5J6N163
LinkDB
All DBs
Position
complement(4125570..4126817)
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AA seq
415 aa
AA seq
DB search
MPKAEPARVFVAERGEERHVALWRRGRLAAYRIDAPDRRDRSGALFLGQVVRVDHGLDAA
FVAFDQTEAGLDTGLLPLRRGEKRVEGDRLPVQVMRDPSGEKSPRLTAAPILEGRFVDLL
AKESGVHMAGVAFTPEETRRLHTALRGLSAQSQAGLRLTLRAAHAPVDSIVKEASMLAAS
WQGCAEASTQATAPGPLRPAPGALLSLLQELPGEEAVLLTADNRTLARRIETELAASAIE
GVAIEVQPLRDWVPSPADLEEAVQSALEPRLALSGGGWLLFEPGETLTAIDVNSGTASDR
RPAASRTDLRLKLNLQAVEAIAHQLRLRAIGGLVVIDFIDMESSADRDRVVKALRHALAD
DPARTRVLPMSDLGLVQMTRQRRGAPLTELFLGPCEAGEATGRLMRRRPIGGSPG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccgagcccgcgcgggtctttgtcgccgaacgcggcgaggaacgtcacgtg
gcgctgtggcgccgcggacggctcgccgcctatcgcatcgacgctcccgaccggcgcgac
cgcagcggcgccttgttcctggggcaggtggtgcgggtcgatcacggcctggatgccgcc
ttcgtcgctttcgaccagaccgaggccggccttgataccgggctgctgcccctgcgccgg
ggcgaaaagcgcgtcgaaggcgatcgcctgccggtccaggtgatgcgcgatcccagcggc
gagaaatcgccgaggctaaccgcagcccccattctcgagggccgcttcgtcgaccttctg
gccaaggagagcggcgtccatatggcgggcgtggcgttcacgccggaagagacgcgacgc
ttgcacacggcgttgcgcggcctctctgcccagagccaggccggcctccgcctgacgctg
cgcgcggcgcacgctccggtcgacagcatcgtcaaggaagcgtcgatgctggcggcgagc
tggcagggctgcgccgaagcctcgacccaagcgaccgctcccggccccttgcggccggcg
ccgggcgctctgctgtccctgttgcaggagctgccgggtgaagaggcggtcttgctcacc
gccgacaatcgcaccctggcgcgacggatcgagaccgagcttgccgcctcggccatcgaa
ggggtcgccatcgaggtgcagccgttgcgcgattgggttccttccccggccgacctggag
gaggctgtccagagcgccctcgagccgcggctggcgctttccggcggcggatggctcctg
ttcgagccgggcgaaaccctgacggccatcgatgtgaacagcgggacggcatccgaccgc
cgcccggccgccagccgcaccgatctgcggctcaagctgaatttgcaggctgtcgaggcg
atcgcccatcagctgcgcctgcgcgccatcggcgggctggtggtgatcgacttcatcgat
atggagagcagcgccgaccgtgaccgggtggtgaaggccctgcgccacgcgcttgccgac
gaccccgcgcgaacccgcgtgttgccgatgtcggatctgggactggtgcagatgacccgg
caacggcgcggtgctcctctcaccgagctgttcctcgggccttgcgaggccggcgaggcg
accggtaggctgatgcgccggcgaccgatcgggggcagccccggatga
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