Hypericibacter adhaerens: FRZ61_44890
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Entry
FRZ61_44890 CDS
T06413
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
hadh
Hypericibacter adhaerens
Brite
KEGG Orthology (KO) [BR:
hadh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hadh03019
]
FRZ61_44890
Enzymes [BR:
hadh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FRZ61_44890
Messenger RNA biogenesis [BR:
hadh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FRZ61_44890
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
Flavi_DEAD
Ferredoxin_N
Motif
Other DBs
NCBI-ProteinID:
QEX24548
UniProt:
A0A5J6N3R4
LinkDB
All DBs
Position
complement(4988184..4990691)
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AA seq
835 aa
AA seq
DB search
MIKLPIEDALPALKETLARSSSAVLVAPPGAGKTTRVPPALLDEPWVQGRKILVLEPRRL
AARAAAHRIAQERGEAVGGTVGFRVRLQSQVGPRTRIEFLTEGLFARRILADPGLEGVAA
VLFDEFHERSLDADLGMALALDAQRLLREDLRILAMSATLDGARVAALLGDGKTDAPLIR
SEGRLFEIETRYRGRERHQPIEPQVAETVLKALDAERGGILVFLPGAREIRRVERLLAER
LKDPDVILAPLYGAMEGGEQDRAIAPAPRGKRKIVLATSIAETSLTIEGVRVVVDSGLAR
VPRYDPAKGLTELATVRVSRAAADQRRGRAGRTEPGICYRLWDEAETRALEPFPRPEILE
TDLAALALTLAEWGTADPGDLAWLDPPPKAGFAAARELLLGLDALDAQGRITTHGKALAR
LPLPPRLAHMVRAAAEQGEGTLAAEIALLLTERGLGGTDSDLRHRLSLFARDRSERARDA
RRLAEGWQRLASPEAARLDLERPRDPARAGALLALAYPDRVAQARPGKRGEYLLANGRGG
RLEATDSLASEPYLAVAEIAGEAAASRVVLAAPIAEAEIEKDFAAHIEMRELIEFDPATR
SVKARRLRRFGQIVLSETRIERPDGESVAQALIEGLRGLGLGALPWSEGHQQWRARVAFL
RAQETAPGSEAWPDLSDATLLATLEDWLGPFLAGQRSLNEIDGSLLSHALEGMLTPEQQR
RLKRFAPTHLTLPTGRDAVIDYGADGGPTLSVKLQELFGLAQHPSLVEGRVPITLALLSP
AGRPVQVTRDLPGFWRGSYKAVRAEMRGRYPKHPWPEDPLTAPPTARAKRPGSAG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaattgccgatcgaagacgcgttgccggcgctgaaggagacgctggcgcgctcg
tccagcgcggtgctggtggccccgcccggtgccggcaagaccacgcgcgtgccgccggcc
ctgctcgacgagccctgggtccagggccgcaagatcctggtgctggagccgcggcggctg
gccgcgcgcgccgccgcccatcgcattgcgcaggagcgtggcgaggcggtcggcgggacc
gtgggcttccgcgtgcggctgcagtcgcaggtgggtccgcgcacccgcatcgagttcctg
accgaggggctgttcgcgcggcgcatcctggccgatcccgggctcgagggcgtggcggcc
gtgctgttcgacgagttccatgagcgcagcctcgatgccgatctcggcatggcattggcg
ctcgatgcgcagcgcctgctgcgcgaggatctgaggatcctcgccatgtcggcgacgctc
gacggcgcgcgggtcgcggcgctgctgggcgacggcaagacagacgcgccgctgatccgc
agcgagggacgcctgttcgagatcgagacgcgctatcgcggccgcgagcgccaccagccg
atcgagccgcaggtcgccgagacggtgctgaaggcgctcgatgccgagcgcggcggcatc
ctcgtcttcctgccgggcgcgcgcgagatccggcgcgtcgagcggctgctggcggagcgc
ctcaaggatcccgacgtgatcctggcgccgctctatggcgcgatggagggcggcgagcag
gaccgcgccatcgccccggcgccgcgcggcaagcgcaagatcgtgctcgccacctcgatc
gccgaaaccagcctcaccatcgagggcgtgcgggtggtggtggattcggggctcgctcgc
gtgccgcgctacgatccggccaagggcctgaccgagctcgccaccgtgcgggtctcgcgc
gccgcggccgaccagcgccgcggccgcgccggtcgcaccgagcccggcatctgctatcgc
ctgtgggacgaggccgagacacgggcgctggagcccttcccgcggcccgagattctcgag
accgatctcgcggccctggcgctcacgctggcggaatggggcacggccgatcccggcgat
ctcgcctggctcgatccgccgcccaaggccggtttcgccgcggcgcgcgagctgctctta
ggtcttgatgcgctggatgcccaagggcgcatcaccacgcatggcaaggcgctggcgcgc
ctgccgctgcccccgcgtctggcgcatatggtgcgggcggcggcggagcagggggagggc
acgctcgcggccgagatcgccctgctcctgactgagcgcggcctgggcggcaccgacagc
gatctgcgccaccgcctctcgctcttcgccagggatcgcagcgagcgcgcccgcgacgcg
cgccggctcgccgaaggctggcagcgcctcgcctcgccggaagcggcgcgcctcgatctg
gagcgtccgcgcgatcccgcccgcgcgggggcgctgctcgccttggcctatccggaccgc
gtggcgcaggcccggcccggcaagcgcggcgaatatctcctggccaatggccgcggcggc
cgtctcgaggcgacggattcgctggcgagcgaaccctatctcgccgtcgccgagatcgcc
ggcgaggcggccgcgtcgcgtgtcgtcctcgcagcacccatcgcggaggccgagatcgag
aaggatttcgccgcccatatcgagatgcgcgagctgatcgagttcgatcccgcgacgcgc
agcgtgaaggcgcggcggttgcgccgcttcggacagatcgtgctgagcgaaacccggatc
gagcggcccgacggcgagagcgtggcgcaggccctgatcgaaggcctgcgcgggctgggt
ctcggcgccctgccctggagcgagggtcaccagcaatggcgcgcgcgggtcgccttcctg
cgcgcgcaagagacggccccgggttcggaagcctggcccgacctgagcgacgcgaccttg
ctggcgacgctcgaggattggctcgggccctttctcgccgggcagcgcagcctcaatgag
atcgatggctcgctgctgagccacgcgctggagggaatgctgacgcccgagcagcagcgc
cggctgaagcgtttcgcgccgacccatctgacgctgccgaccggacgcgacgccgtcatc
gattatggcgccgatggcgggccgaccttgtcggtcaagctgcaggagctgttcggcctg
gcgcagcatccgagcctggtcgaaggccgcgtgccgatcacgctggccttgctctcgccg
gcggggcgtccggtccaggtcacgcgcgatctgccgggcttctggcgcggctcctacaag
gccgtgcgcgcggagatgcgcggccgctatcccaagcatccctggcccgaggatcccctg
acggcgcctcccaccgcgcgcgccaagcggccgggcagcgccggctga
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